RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
PBRM1-201ENST00000296302 TBX22Q9Y458 520 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 CHUKO15111 745 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 EXOC3L4Q17RC7 722 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 N4BP2L2Q92802 583 aaPredicted RBP12.07□□□□□ -0.48
PBRM1-201ENST00000296302 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 LARGE1O95461 756 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 HSPA6P17066 643 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
PBRM1-201ENST00000296302 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
PBRM1-201ENST00000296302 ARHGEF18Q6ZSZ5 1173 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 ANKRD35Q8N283 1001 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 GSDMBQ8TAX9 411 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 AK8Q96MA6 479 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 ARHGEF10LQ9HCE6 1279 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 TXLNGQ9NUQ3 528 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
PBRM1-201ENST00000296302 GIPC1O14908 333 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 COG7P83436 770 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 FTOQ9C0B1 505 aaKnown RBP eCLIP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 SAMSN1Q9NSI8 373 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 MAST3O60307 1309 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 A0A087WWV3 80 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 USP17L12C9JPN9 530 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 USP17L21D6R901 530 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 SEMA3EO15041 775 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 LMNB2Q03252 620 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 MAGOHBQ96A72 148 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 EIF3CQ99613 913 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 DBNLQ9UJU6 430 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 HIBCHQ6NVY1 386 aaPredicted RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 TUBB6Q9BUF5 446 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 RTCBQ9Y3I0 505 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 MFAP3LO75121 409 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 SP4Q02446 784 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 NECTIN1Q15223 517 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 GLE1Q53GS7 698 aaKnown RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 C10orf76Q5T2E6 689 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
PBRM1-201ENST00000296302 SLFN12Q8IYM2 578 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 THAP9Q9H5L6 903 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 COL4A3BPQ9Y5P4 624 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
PBRM1-201ENST00000296302 DAPK3O43293 454 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 VPS41P49754 854 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 CYP2J2P51589 502 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 DHX9Q08211 1270 aaKnown RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ADAT2Q7Z6V5 191 aaKnown RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 FAF1Q9UNN5 650 aaPredicted RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ATP1A3P13637 1013 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 YWHAEP62258 255 aaKnown RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 PDE1CQ14123 709 aaPredicted RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 PTPROQ16827 1216 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 NBPF9Q3BBW0 867 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 NHEJ1Q9H9Q4 299 aaPredicted RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 SCOCQ9UIL1 159 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ATP8A1Q9Y2Q0 1164 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 CLASP1Q7Z460 1538 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 CD19P15391 556 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 CUL1Q13616 776 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 TAF11Q15544 211 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 FBXO41Q8TF61 875 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 SKIP12755 728 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 PDE6CP51160 858 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ARHGAP4P98171 946 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 NAA35Q5VZE5 725 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 MAEAQ7L5Y9 396 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 PFDN4Q9NQP4 134 aa12.05□□□□□ -0.48
PBRM1-201ENST00000296302 SRPRBQ9Y5M8 271 aaKnown RBP12.05□□□□□ -0.48
PBRM1-201ENST00000296302 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 MMP1P03956 469 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 DBN1Q16643 649 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 HADHQ16836 314 aaKnown RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 CIAO1O76071 339 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 ARHGEF25Q86VW2 580 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 TRIM42Q8IWZ5 723 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 NOVA2Q9UNW9 492 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms