RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 KLF18A0A0U1RQI7 1052 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 PPP1R11O60927 126 aaPredicted RBP15.54■□□□□ 0.08
VPS28-201ENST00000292510 IGHA2P01877 340 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 CCND3P30281 292 aaPredicted RBP15.54■□□□□ 0.08
VPS28-201ENST00000292510 CNTN2Q02246 1040 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 APOBRQ0VD83 1088 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 MFSD14CQ5VZR4 134 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 OLFML2BQ68BL8 750 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 APOA5Q6Q788 366 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 FBXO11Q86XK2 927 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 BRF1Q92994 677 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 MTMR8Q96EF0 704 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 FGD4Q96M96 766 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 PURBQ96QR8 312 aaKnown RBP15.54■□□□□ 0.08
VPS28-201ENST00000292510 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
VPS28-201ENST00000292510 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
VPS28-201ENST00000292510 BAZ2BQ9UIF8 2168 aaKnown RBP15.53■□□□□ 0.08
VPS28-201ENST00000292510 RPTORQ8N122 1335 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 ZBTB5O15062 677 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 EN2P19622 333 aaPredicted RBP15.53■□□□□ 0.08
VPS28-201ENST00000292510 KIF5BP33176 963 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 PRAMEF19Q5SWL8 479 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 SYNE3Q6ZMZ3 975 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 RUFY3Q7L099 469 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 SRBD1Q8N5C6 995 aaKnown RBP15.53■□□□□ 0.08
VPS28-201ENST00000292510 FANCBQ8NB91 859 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 TRPV1Q8NER1 839 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 DEFB118Q96PH6 123 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.53■□□□□ 0.083e-6■■□□□ 14.1
VPS28-201ENST00000292510 HMX1Q9NP08 348 aaPredicted RBP15.53■□□□□ 0.08
VPS28-201ENST00000292510 CYP39A1Q9NYL5 469 aa15.53■□□□□ 0.08
VPS28-201ENST00000292510 DIS3Q9Y2L1 958 aaKnown RBP15.53■□□□□ 0.08
VPS28-201ENST00000292510 PFASO15067 1338 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 PTPDC1A2A3K4 754 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 SOWAHBA6NEL2 793 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 POTEB2H3BUK9 544 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 ZBTB43O43298 467 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 CALM1P0DP23 149 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 CALM2P0DP24 149 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 CALM3P0DP25 149 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
VPS28-201ENST00000292510 SLC30A10Q6XR72 485 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 CCDC82Q8N4S0 544 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 TBC1D5Q92609 795 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 TINF2Q9BSI4 451 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 PAK6Q9NQU5 681 aaPredicted RBP15.52■□□□□ 0.08
VPS28-201ENST00000292510 PNMA2Q9UL42 364 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 CYP46A1Q9Y6A2 500 aa15.52■□□□□ 0.08
VPS28-201ENST00000292510 DDX49Q9Y6V7 483 aaKnown RBP15.52■□□□□ 0.08
VPS28-201ENST00000292510 ASTN1O14525 1302 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 ABCB11O95342 1321 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 PLXNA1Q9UIW2 1896 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 GOLGA8AA7E2F4 631 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 GOLGA8BA8MQT2 603 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 GJB1P08034 283 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 CALML3P27482 149 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 GNAQP50148 359 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 TMTC3Q6ZXV5 915 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 U2AF1L4Q8WU68 220 aaKnown RBP15.51■□□□□ 0.07
VPS28-201ENST00000292510 SHISA4Q96DD7 197 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
VPS28-201ENST00000292510 SPZ1Q9BXG8 430 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 AMNQ9BXJ7 453 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 AGXT2Q9BYV1 514 aa15.51■□□□□ 0.07
VPS28-201ENST00000292510 PNMA6FA0A0J9YX94 578 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 hCG_1642624A0A1W2PR95 340 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 CYBAP13498 195 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 CNGA1P29973 690 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 CDC27P30260 824 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 GJA8P48165 433 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 ANAPC15P60006 121 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 RPS6P62753 249 aaKnown RBP15.5■□□□□ 0.07
VPS28-201ENST00000292510 TOB2Q14106 344 aaPredicted RBP15.5■□□□□ 0.07
VPS28-201ENST00000292510 RTN1Q16799 776 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 RNF207Q6ZRF8 634 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 FBXL16Q8N461 479 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
VPS28-201ENST00000292510 FAM217BQ9NTX9 383 aaPredicted RBP15.5■□□□□ 0.07
VPS28-201ENST00000292510 OPLAHO14841 1288 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 EIF5BO60841 1220 aaKnown RBP15.49■□□□□ 0.07
VPS28-201ENST00000292510 SGPL1O95470 568 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 SNAI1O95863 264 aaPredicted RBP15.49■□□□□ 0.07
VPS28-201ENST00000292510 METAP2P50579 478 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS28-201ENST00000292510 ANO1Q5XXA6 986 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 MAMDC4Q6UXC1 1216 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 ARMCX2Q7L311 632 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
VPS28-201ENST00000292510 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 MRPL11Q9Y3B7 192 aaKnown RBP15.49■□□□□ 0.07
VPS28-201ENST00000292510 PCDHA1Q9Y5I3 950 aa15.49■□□□□ 0.07
VPS28-201ENST00000292510 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
VPS28-201ENST00000292510 CNTNAP5Q8WYK1 1306 aa15.48■□□□□ 0.07
VPS28-201ENST00000292510 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
VPS28-201ENST00000292510 ADD1P35611 737 aaKnown RBP15.48■□□□□ 0.07
VPS28-201ENST00000292510 FUT2Q10981 343 aa15.48■□□□□ 0.07
VPS28-201ENST00000292510 ZNF467Q7Z7K2 595 aaPredicted RBP15.48■□□□□ 0.07
VPS28-201ENST00000292510 RBM28Q9NW13 759 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms