RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CSADQ9Y600 493 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 ABCD1P33897 745 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 LIG4P49917 911 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 LARP4BQ92615 738 aaKnown RBP14.06□□□□□ -0.16
PTCD1-201ENST00000292478 PPEF1O14829 653 aaPredicted RBP14.05□□□□□ -0.16
PTCD1-201ENST00000292478 SLFN14P0C7P3 912 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 GOLGA8HP0CJ92 632 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 THRAP3Q9Y2W1 955 aaKnown RBP14.05□□□□□ -0.16
PTCD1-201ENST00000292478 ATP8B1O43520 1251 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 XKR9Q5GH70 373 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 ZNF658Q5TYW1 1059 aaPredicted RBP14.05□□□□□ -0.16
PTCD1-201ENST00000292478 CCDC89Q8N998 374 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 BBOF1Q8ND07 529 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 GMNNO75496 209 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 KRT19P08727 400 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 PSMC4P43686 418 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 PDE6CP51160 858 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 ANTXR1Q9H6X2 564 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 RAB20Q9NX57 234 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 ALAS1P13196 640 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 HADHQ16836 314 aaKnown RBP14.05□□□□□ -0.16
PTCD1-201ENST00000292478 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 VPS52Q8N1B4 723 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 CNOT6LQ96LI5 555 aaKnown RBP14.05□□□□□ -0.16
PTCD1-201ENST00000292478 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 UNC13BO14795 1591 aa14.05□□□□□ -0.16
PTCD1-201ENST00000292478 TSPOAP1O95153 1857 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 TMEM232C9JQI7 657 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 KRIT1O00522 736 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 TNNC2P02585 160 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 RASA3Q14644 834 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 KRT71Q3SY84 523 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 SRGAP1Q7Z6B7 1085 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 SPATS2Q86XZ4 545 aaKnown RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 C10orf67Q8IYJ2 551 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 CCT6BQ92526 530 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 GLG1Q92896 1179 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 CABS1Q96KC9 395 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 TUBGCP2Q9BSJ2 902 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 KCNK3O14649 394 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 BPIFB4P59827 614 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 POLR2FP61218 127 aaKnown RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 TSC1Q92574 1164 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 PSMB7Q99436 277 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 MED4Q9NPJ6 270 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 PPP1R2P3Q6NXS1 205 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 DESI2Q9BSY9 194 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 MLXIPQ9HAP2 919 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 NRBP2Q9NSY0 501 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 I3L4J1 428 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 SASH1O94885 1247 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 LMNB1P20700 586 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 P2RX5Q93086 422 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 OSBP2Q969R2 916 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 SERPINA10Q9UK55 444 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
PTCD1-201ENST00000292478 LRMPQ12912 555 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 RESTQ13127 1097 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 GAS2L3Q86XJ1 694 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 RABGGTAQ92696 567 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 KANSL2Q9H9L4 492 aa14.04□□□□□ -0.16
PTCD1-201ENST00000292478 PHBP35232 272 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 SARNPP82979 210 aaKnown RBP14.03□□□□□ -0.16
PTCD1-201ENST00000292478 PSMD2Q13200 908 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 EXOC3L4Q17RC7 722 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 CACNA2D3Q8IZS8 1091 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 WDR19Q8NEZ3 1342 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 ARMCX5Q6P1M9 558 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 WDR11Q9BZH6 1224 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 RWDD2AQ9UIY3 292 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 MED14O60244 1454 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 ATF7P17544 494 aaPredicted RBP14.03□□□□□ -0.16
PTCD1-201ENST00000292478 CCDC62Q6P9F0 684 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 KIAA0825Q8IV33 1275 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 CDC23Q9UJX2 597 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 TRPC5Q9UL62 973 aaPredicted RBP14.03□□□□□ -0.16
PTCD1-201ENST00000292478 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
PTCD1-201ENST00000292478 KRT15P19012 456 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 ERCC3P19447 782 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 POLR2BP30876 1174 aaKnown RBP14.03□□□□□ -0.16
PTCD1-201ENST00000292478 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
PTCD1-201ENST00000292478 SCNN1DP51172 638 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 NEDD9Q14511 834 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 SH3GLB2Q9NR46 395 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 HOMER3Q9NSC5 361 aa14.03□□□□□ -0.16
PTCD1-201ENST00000292478 CLEC4GQ6UXB4 293 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 HAUS1Q96CS2 278 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 PPP1R13BQ96KQ4 1090 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 PUS7LQ9H0K6 701 aaKnown RBP14.02□□□□□ -0.16
PTCD1-201ENST00000292478 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms