RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
CCDC58-201ENST00000291458 PTH1RQ03431 593 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
CCDC58-201ENST00000291458 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 ABRAQ8N0Z2 381 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 CHURC1Q8WUH1 139 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 CCPG1Q9ULG6 757 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 DDX49Q9Y6V7 483 aaKnown RBP11.49□□□□□ -0.57
CCDC58-201ENST00000291458 PFASO15067 1338 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 RAD50Q92878 1312 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 PDHBP11177 359 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 SYN1P17600 705 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 ZNF792Q3KQV3 632 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 SYDE2Q5VT97 1194 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 NSMFQ6X4W1 530 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 UBAC1Q9BSL1 405 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 ACAD9Q9H845 621 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 CTNNA3Q9UI47 895 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 ZNF536O15090 1300 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 TNKSO95271 1327 aa11.48□□□□□ -0.57
CCDC58-201ENST00000291458 DHX16O60231 1041 aaKnown RBP11.47□□□□□ -0.57
CCDC58-201ENST00000291458 CNTN2Q02246 1040 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 IQCA1Q86XH1 822 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
CCDC58-201ENST00000291458 TINF2Q9BSI4 451 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 SENP6Q9GZR1 1112 aaPredicted RBP11.47□□□□□ -0.57
CCDC58-201ENST00000291458 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 TAF6LQ9Y6J9 622 aa11.47□□□□□ -0.57
CCDC58-201ENST00000291458 KBTBD13C9JR72 458 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 ATP2A1O14983 1001 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 SGSM2O43147 1006 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 SEPT4O43236 478 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.57
CCDC58-201ENST00000291458 OAZ1P54368 228 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 ZNF543Q08ER8 600 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 USH1GQ495M9 461 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 CENPQQ7L2Z9 268 aaPredicted RBP11.46□□□□□ -0.57
CCDC58-201ENST00000291458 CHST3Q7LGC8 479 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
CCDC58-201ENST00000291458 PNMA1Q8ND90 353 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 CHST13Q8NET6 341 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 KCNV2Q8TDN2 545 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 FERMT2Q96AC1 680 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 PURBQ96QR8 312 aaKnown RBP11.46□□□□□ -0.57
CCDC58-201ENST00000291458 KRT23Q9C075 422 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 UBA5Q9GZZ9 404 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 A1CFQ9NQ94 594 aaKnown RBP11.46□□□□□ -0.57
CCDC58-201ENST00000291458 TCP11L1Q9NUJ3 509 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 FBXO40Q9UH90 709 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
CCDC58-201ENST00000291458 PTPDC1A2A3K4 754 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 NFIBO00712 420 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 MSCO60682 206 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 PGK1P00558 417 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 NEFLP07196 543 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 RARBP10826 455 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 TRDNQ13061 729 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 IFIT1BQ5T764 474 aaKnown RBP11.45□□□□□ -0.58
CCDC58-201ENST00000291458 ARMCX2Q7L311 632 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
CCDC58-201ENST00000291458 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 FGD4Q96M96 766 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 RANBP17Q9H2T7 1088 aaKnown RBP11.45□□□□□ -0.58
CCDC58-201ENST00000291458 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 XPNPEP3Q9NQH7 507 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
CCDC58-201ENST00000291458 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
CCDC58-201ENST00000291458 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
CCDC58-201ENST00000291458 MKI67P46013 3256 aaKnown RBP11.45□□□□□ -0.58
CCDC58-201ENST00000291458 IGHA2P01877 340 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 ICAM1P05362 532 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 CYP21A2P08686 494 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 AKR1A1P14550 325 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 PTGS1P23219 599 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 NOVP48745 357 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 CDC37Q16543 378 aaPredicted RBP11.44□□□□□ -0.58
CCDC58-201ENST00000291458 HABP4Q5JVS0 413 aaKnown RBP11.44□□□□□ -0.58
CCDC58-201ENST00000291458 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
CCDC58-201ENST00000291458 SLC30A10Q6XR72 485 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
CCDC58-201ENST00000291458 EEPD1Q7L9B9 569 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 CCDC144CPQ8IYA2 1237 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 ANO2Q9NQ90 1003 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 ATP11BQ9Y2G3 1177 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 CEP290O15078 2479 aa11.44□□□□□ -0.58
CCDC58-201ENST00000291458 SYNGAP1Q96PV0 1343 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 DNAJC25-GNG10A0A024R161 153 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 DNM1LO00429 736 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms