RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 C22orf23Q9BZE7 217 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 HTTP42858 3142 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 PLEKHA8P1O95397 391 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 ELNP15502 786 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 ZNF792Q3KQV3 632 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 FBXO11Q86XK2 927 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 ANKRD35Q8N283 1001 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 SH3TC2Q8TF17 1288 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 TRIB2Q92519 343 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 PIGSQ96S52 555 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 AMNQ9BXJ7 453 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 A1CFQ9NQ94 594 aaKnown RBP31.22■■■□□ 2.59
SSU72-201ENST00000291386 ABCB11O95342 1321 aa31.22■■■□□ 2.59
SSU72-201ENST00000291386 PNMA6FA0A0J9YX94 578 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 GOLGA8AA7E2F4 631 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 GOLGA8BA8MQT2 603 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 HMGCRP04035 888 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 TRAF1Q13077 416 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 OLFML2BQ68BL8 750 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 CLEC4DQ8WXI8 215 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 DDX11Q96FC9 970 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 FAM217BQ9NTX9 383 aaPredicted RBP31.21■■■□□ 2.59
SSU72-201ENST00000291386 PFASO15067 1338 aa31.21■■■□□ 2.59
SSU72-201ENST00000291386 TAL1P17542 331 aaPredicted RBP31.2■■■□□ 2.59
SSU72-201ENST00000291386 METAP2P50579 478 aaKnown RBP eCLIP31.2■■■□□ 2.59
SSU72-201ENST00000291386 UPF2Q9HAU5 1272 aaKnown RBP31.2■■■□□ 2.59
SSU72-201ENST00000291386 CCDC196A0A1B0GTZ2 297 aa31.19■■■□□ 2.58
SSU72-201ENST00000291386 PPP1R11O60927 126 aaPredicted RBP31.19■■■□□ 2.58
SSU72-201ENST00000291386 PGK2P07205 417 aa31.19■■■□□ 2.58
SSU72-201ENST00000291386 PDIA3P30101 505 aaKnown RBP31.19■■■□□ 2.58
SSU72-201ENST00000291386 UBXN2AP68543 259 aa31.19■■■□□ 2.58
SSU72-201ENST00000291386 CCL14Q16627 93 aa31.19■■■□□ 2.58
SSU72-201ENST00000291386 RGS22Q8NE09 1264 aa31.19■■■□□ 2.58
SSU72-201ENST00000291386 ZNF274Q96GC6 653 aaPredicted RBP31.19■■■□□ 2.58
SSU72-201ENST00000291386 FLRT1Q9NZU1 646 aa31.19■■■□□ 2.58
SSU72-201ENST00000291386 CDC27P30260 824 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 USH1GQ495M9 461 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 HOMER1Q86YM7 354 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 RRP36Q96EU6 259 aaKnown RBP31.18■■■□□ 2.58
SSU72-201ENST00000291386 MAML3Q96JK9 1138 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 KIF2CQ99661 725 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 BACH2Q9BYV9 841 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 CYP39A1Q9NYL5 469 aa31.18■■■□□ 2.58
SSU72-201ENST00000291386 NFIBO00712 420 aa31.17■■■□□ 2.58
SSU72-201ENST00000291386 INHAP05111 366 aa31.17■■■□□ 2.58
SSU72-201ENST00000291386 FUT2Q10981 343 aa31.17■■■□□ 2.58
SSU72-201ENST00000291386 ANKRD1Q15327 319 aa31.17■■■□□ 2.58
SSU72-201ENST00000291386 CMTR1Q8N1G2 835 aaKnown RBP31.17■■■□□ 2.58
SSU72-201ENST00000291386 FAM133AQ8N9E0 248 aa31.17■■■□□ 2.58
SSU72-201ENST00000291386 NAP1L2Q9ULW6 460 aaPredicted RBP31.17■■■□□ 2.58
SSU72-201ENST00000291386 MRPL11Q9Y3B7 192 aaKnown RBP31.17■■■□□ 2.58
SSU72-201ENST00000291386 MAP3K21Q5TCX8 1036 aa31.16■■■□□ 2.58
SSU72-201ENST00000291386 ZNF467Q7Z7K2 595 aaPredicted RBP31.16■■■□□ 2.58
SSU72-201ENST00000291386 BIN2Q9UBW5 565 aaPredicted RBP31.16■■■□□ 2.58
SSU72-201ENST00000291386 PCDHA1Q9Y5I3 950 aa31.16■■■□□ 2.58
SSU72-201ENST00000291386 CNTNAP5Q8WYK1 1306 aa31.16■■■□□ 2.58
SSU72-201ENST00000291386 RBBP6Q7Z6E9 1792 aaKnown RBP31.15■■■□□ 2.58
SSU72-201ENST00000291386 ADD1P35611 737 aaKnown RBP31.15■■■□□ 2.58
SSU72-201ENST00000291386 NSMFQ6X4W1 530 aa31.15■■■□□ 2.58
SSU72-201ENST00000291386 MSL3Q8N5Y2 521 aaKnown RBP31.15■■■□□ 2.58
SSU72-201ENST00000291386 SEC63Q9UGP8 760 aaKnown RBP31.15■■■□□ 2.58
SSU72-201ENST00000291386 LCTP09848 1927 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 POTEB2H3BUK9 544 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 NEK4P51957 841 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 AK2P54819 239 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 GHRHRQ02643 423 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 MFSD14CQ5VZR4 134 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 MCF2L2Q86YR7 1114 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 FGD4Q96M96 766 aa31.14■■■□□ 2.58
SSU72-201ENST00000291386 MAMDC4Q6UXC1 1216 aa31.13■■■□□ 2.57
SSU72-201ENST00000291386 RNF207Q6ZRF8 634 aa31.13■■■□□ 2.57
SSU72-201ENST00000291386 SAMD3Q8N6K7 520 aa31.13■■■□□ 2.57
SSU72-201ENST00000291386 TRIM32Q13049 653 aa31.12■■■□□ 2.57
SSU72-201ENST00000291386 BAATQ14032 418 aaPredicted RBP31.12■■■□□ 2.57
SSU72-201ENST00000291386 CCDC82Q8N4S0 544 aa31.12■■■□□ 2.57
SSU72-201ENST00000291386 TINF2Q9BSI4 451 aa31.12■■■□□ 2.57
SSU72-201ENST00000291386 MAP3K20Q9NYL2 800 aaKnown RBP31.12■■■□□ 2.57
SSU72-201ENST00000291386 RPS6P62753 249 aaKnown RBP31.11■■■□□ 2.57
SSU72-201ENST00000291386 CNTN2Q02246 1040 aa31.11■■■□□ 2.57
SSU72-201ENST00000291386 CACNB2Q08289 660 aaPredicted RBP31.11■■■□□ 2.57
SSU72-201ENST00000291386 MTFR1Q15390 333 aa31.11■■■□□ 2.57
SSU72-201ENST00000291386 RPTORQ8N122 1335 aa31.11■■■□□ 2.57
SSU72-201ENST00000291386 IL27Q8NEV9 243 aa31.11■■■□□ 2.57
SSU72-201ENST00000291386 TBC1D32Q96NH3 1257 aa31.11■■■□□ 2.57
SSU72-201ENST00000291386 SYNGAP1Q96PV0 1343 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 PTPDC1A2A3K4 754 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 OPLAHO14841 1288 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 PRKAR2AP13861 404 aaKnown RBP31.1■■■□□ 2.57
SSU72-201ENST00000291386 NTRK3Q16288 839 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 PIBF1Q8WXW3 757 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 LARP6Q9BRS8 491 aaKnown RBP31.1■■■□□ 2.57
SSU72-201ENST00000291386 NRBP1Q9UHY1 535 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 TPCN1Q9ULQ1 816 aa31.1■■■□□ 2.57
SSU72-201ENST00000291386 LOC102724159A0A0B4J2E5 919 aa31.09■■■□□ 2.57
SSU72-201ENST00000291386 SOWAHBA6NEL2 793 aa31.09■■■□□ 2.57
SSU72-201ENST00000291386 CCL5P13501 91 aa31.09■■■□□ 2.57
SSU72-201ENST00000291386 CYP2C19P33261 490 aa31.09■■■□□ 2.57
SSU72-201ENST00000291386 CCT2P78371 535 aaKnown RBP31.09■■■□□ 2.57
SSU72-201ENST00000291386 PWP2Q15269 919 aaKnown RBP31.09■■■□□ 2.57
SSU72-201ENST00000291386 SLC30A10Q6XR72 485 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms