RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CFBP00751 764 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 GYS2P54840 703 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 TMEM232C9JQI7 657 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 E7EWF7 191 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 JAK2O60674 1132 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 VEGFAP15692 232 aaPredicted RBP12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 NEDD9Q14511 834 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 PPP1R7Q15435 360 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 TSNAXIP1Q2TAA8 658 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 RUFY4Q6ZNE9 571 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 FBXO18Q8NFZ0 1043 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 BICD1Q96G01 975 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 PSMD14O00487 310 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 DDAH1O94760 285 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 GDF11O95390 407 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 CNGA1P29973 690 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 WHAMMP3Q1A5X7 153 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 CCDC25Q86WR0 208 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 NRXN3Q9Y4C0 1643 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 RXRAP19793 462 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 MCAMP43121 646 aa12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
NPC1L1-201ENST00000289547 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 E2F5Q15329 346 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ASPRV1Q53RT3 343 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 KRT25Q7Z3Z0 450 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.43e-7■■■■■ 27.9
NPC1L1-201ENST00000289547 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 KIAA1468Q9P260 1216 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 STAMBPO95630 424 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 SLC8A1P32418 973 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ECE1P42892 770 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ARHGEF16Q5VV41 709 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 FBXO11Q86XK2 927 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 MIPOL1Q8TD10 442 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 SMC6Q96SB8 1091 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ADD3Q9UEY8 706 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 SPATS2Q86XZ4 545 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 CACNA2D3Q8IZS8 1091 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 MLKLQ8NB16 471 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 SAR1BQ9Y6B6 198 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 LOC102724159A0A0B4J2E5 919 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 FGAP02671 866 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 PRDX5P30044 214 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 PWP2Q15269 919 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ME3Q16798 604 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 USP37Q86T82 979 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 CCDC170Q8IYT3 715 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 STMN2Q93045 179 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 TSGA10Q9BZW7 698 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 VCXQ9H320 206 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 CCPG1Q9ULG6 757 aa12.57□□□□□ -0.4
NPC1L1-201ENST00000289547 SLIT2O94813 1529 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 ASIC1P78348 528 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 SP4Q02446 784 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 PAK2Q13177 524 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 SNCBQ16143 134 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 LRRC45Q96CN5 670 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 TBC1D31Q96DN5 1066 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 MORC2Q9Y6X9 1032 aaPredicted RBP12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 SETSIPP0DME0 302 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 TRMT44Q8IYL2 757 aaKnown RBP12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 CCDC151A5D8V7 595 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 M0QZ92 97 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 GBP1P32455 592 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 PDE4DQ08499 809 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 TBC1D8BQ0IIM8 1120 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 SEPT6Q14141 434 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 PARD6BQ9BYG5 372 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 OSBPL3Q9H4L5 887 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 MTRF1LQ9UGC7 380 aaKnown RBP12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms