RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 UIMC1Q96RL1 719 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 ZNF646O15015 1829 aaPredicted RBP21.75■■□□□ 1.07
BRAF-201ENST00000288602 FKBP1AP62942 108 aaKnown RBP21.74■■□□□ 1.07
BRAF-201ENST00000288602 SPECC1LQ69YQ0 1117 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 SIAH1Q8IUQ4 282 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 GJA10Q969M2 543 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 GREB1LQ9C091 1923 aaPredicted RBP21.74■■□□□ 1.07
BRAF-201ENST00000288602 A0A1B0GTH6 734 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 SNAP25P60880 206 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 JAG1P78504 1218 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 HDLBPQ00341 1268 aaKnown RBP21.74■■□□□ 1.07
BRAF-201ENST00000288602 TBX2Q13207 712 aaPredicted RBP21.74■■□□□ 1.07
BRAF-201ENST00000288602 KMT5BQ4FZB7 885 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 GPATCH4Q5T3I0 446 aaKnown RBP21.74■■□□□ 1.07
BRAF-201ENST00000288602 CDKAL1Q5VV42 579 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 NELFBQ8WX92 580 aa21.74■■□□□ 1.07
BRAF-201ENST00000288602 NUP88Q99567 741 aaPredicted RBP21.74■■□□□ 1.07
BRAF-201ENST00000288602 ZBTB5O15062 677 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 SLC1A4P43007 532 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 PPP1R13BQ96KQ4 1090 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 TRIM49BA6NDI0 452 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 hCG_1984214I3L0E3 225 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 CCT6AP40227 531 aaKnown RBP21.73■■□□□ 1.07
BRAF-201ENST00000288602 PAK1Q13153 545 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 CT47A1Q5JQC4 288 aaPredicted RBP21.73■■□□□ 1.07
BRAF-201ENST00000288602 ZNF713Q8N859 430 aaPredicted RBP21.73■■□□□ 1.07
BRAF-201ENST00000288602 MMTAG2Q9BU76 263 aaKnown RBP21.73■■□□□ 1.07
BRAF-201ENST00000288602 KBTBD4Q9NVX7 518 aa21.73■■□□□ 1.07
BRAF-201ENST00000288602 RAD17O75943 681 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 CALCRLQ16602 461 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 SLFN13Q68D06 897 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 TMX1Q9H3N1 280 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 RIC8AQ9NPQ8 531 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 KLRC4O43908 158 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 GTF2F1P35269 517 aaKnown RBP eCLIP21.72■■□□□ 1.07
BRAF-201ENST00000288602 ICA1Q05084 483 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 RRP1BQ14684 758 aaKnown RBP21.72■■□□□ 1.07
BRAF-201ENST00000288602 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 TC2NQ8N9U0 490 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 KANSL2Q9H9L4 492 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 RMND1Q9NWS8 449 aa21.72■■□□□ 1.07
BRAF-201ENST00000288602 USP17L15C9J2P7 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L13C9JLJ4 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L11C9JVI0 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L18D6R9N7 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L22D6RA61 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L17D6RBQ6 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L19D6RCP7 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L20D6RJB6 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 NRDCO43847 1150 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L24Q0WX57 530 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 USP17L6PQ6QN14 398 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 TMEM139Q8IV31 216 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 CPLX3Q8WVH0 158 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 PKNOX2Q96KN3 472 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 AK8Q96MA6 479 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 MTMR9Q96QG7 549 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 ADD3Q9UEY8 706 aaKnown RBP21.71■■□□□ 1.07
BRAF-201ENST00000288602 RWDD2AQ9UIY3 292 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 CLRN2A0PK11 232 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 POTEMA6NI47 508 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 TCP10L2B9ZVM9 353 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 PMS1P54277 932 aaKnown RBP21.71■■□□□ 1.07
BRAF-201ENST00000288602 QRICH1Q2TAL8 776 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 DEFB132Q7Z7B7 95 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 PSTPIP2Q9H939 334 aa21.71■■□□□ 1.07
BRAF-201ENST00000288602 ABCB5Q2M3G0 1257 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 IGSF22Q8N9C0 903 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 CUL5Q93034 780 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 CSRNP1Q96S65 589 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 ZBTB12Q9Y330 459 aaPredicted RBP21.7■■□□□ 1.06
BRAF-201ENST00000288602 TAL1P17542 331 aaPredicted RBP21.7■■□□□ 1.06
BRAF-201ENST00000288602 VPS16Q9H269 839 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 ZNF277Q9NRM2 450 aaPredicted RBP21.7■■□□□ 1.06
BRAF-201ENST00000288602 KCND1Q9NSA2 647 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 NYAP2Q9P242 653 aa21.7■■□□□ 1.06
BRAF-201ENST00000288602 GH2P01242 217 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 CLK2P49760 499 aaKnown RBP21.69■■□□□ 1.06
BRAF-201ENST00000288602 KRT31Q15323 416 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 MKL1Q969V6 931 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 MTMR8Q96EF0 704 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 EEF2KMTQ96G04 330 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 LRWD1Q9UFC0 647 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 F5H6K3 240 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 KLRC3Q07444 240 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 NUDT12Q9BQG2 462 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 ZMYND15Q9H091 742 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
BRAF-201ENST00000288602 CDC37Q16543 378 aaPredicted RBP21.68■■□□□ 1.06
BRAF-201ENST00000288602 ADSSL1Q8N142 457 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 CCDC112Q8NEF3 446 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 HPS3Q969F9 1004 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 BAG1Q99933 345 aaPredicted RBP21.68■■□□□ 1.06
BRAF-201ENST00000288602 PAXBP1Q9Y5B6 917 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 PSDA5PKW4 1024 aaPredicted RBP21.68■■□□□ 1.06
BRAF-201ENST00000288602 TMEM179Q6ZVK1 233 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 SPICE1Q8N0Z3 855 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 TTLL6Q8N841 843 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 TRIM9Q9C026 710 aa21.68■■□□□ 1.06
BRAF-201ENST00000288602 TAB2Q9NYJ8 693 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms