RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 VIPAS39Q9H9C1 493 aa14.81□□□□□ -0.04
SLC28A1-201ENST00000286749 HPCAL4Q9UM19 191 aa14.81□□□□□ -0.04
SLC28A1-201ENST00000286749 DUSP10Q9Y6W6 482 aa14.81□□□□□ -0.04
SLC28A1-201ENST00000286749 MYL1P05976 194 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 MCM3P25205 808 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 CYP27A1Q02318 531 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 SLC35G1Q2M3R5 365 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 MAP9Q49MG5 647 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 ZNF662Q6ZS27 426 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 GSPT2Q8IYD1 628 aaKnown RBP14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 DHTKD1Q96HY7 919 aaPredicted RBP14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 CNOT6LQ96LI5 555 aaKnown RBP14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 MACROD2A1Z1Q3 448 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 IPO7O95373 1038 aaKnown RBP14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 SYF2O95926 243 aaKnown RBP14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 PLCG1P19174 1290 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 AARSP49588 968 aaKnown RBP eCLIP14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 ZBED6P86452 979 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 CCDC178Q5BJE1 867 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 ANKRD40Q6AI12 368 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 P2RX5Q93086 422 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 DYNLL2Q96FJ2 89 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 MAD2L2Q9UI95 211 aa14.8□□□□□ -0.04
SLC28A1-201ENST00000286749 EIF3CLB5ME19 914 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 PDE2AO00408 941 aaPredicted RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 RPS6KA5O75582 802 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 IDEP14735 1019 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 MTIF2P46199 727 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 PDE4DQ08499 809 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 GRM4Q14833 912 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 BICDL1Q6ZP65 573 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 EIF3CQ99613 913 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 NUP58Q9BVL2 599 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 TRIM34Q9BYJ4 488 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 RASSF4Q9H2L5 321 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 MYH10P35580 1976 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 FLT1P17948 1338 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 TARSL2A2RTX5 802 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 CYTH3O43739 400 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 CCNE1P24864 410 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 HIBADHP31937 336 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 STK4Q13043 487 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 CABP7Q86V35 215 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 RPGRIP1Q96KN7 1286 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 JADE2Q9NQC1 790 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 USP17L3A6NCW0 530 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 USP17L4A6NCW7 530 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 STXBP3O00186 592 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 NKRFO15226 690 aaKnown RBP eCLIP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 MYBL2P10244 700 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 ASIC1P78348 528 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 C2orf54Q08AI8 447 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 USP17L1Q7RTZ2 530 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 CCDC170Q8IYT3 715 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 RETREG2Q8NC44 543 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 DAGLBQ8NCG7 672 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 COG1Q8WTW3 980 aa14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 NOC4LQ9BVI4 516 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-201ENST00000286749 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 ROBO1Q9Y6N7 1651 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 BICDL2A1A5D9 508 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 VGLL3A8MV65 326 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 FCER1AP12319 257 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 TXNRD1Q16881 649 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 MIIPQ5JXC2 388 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 LRRC31Q6UY01 552 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 AFAP1L1Q8TED9 768 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 RIN2Q8WYP3 895 aaPredicted RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 TRIM9Q9C026 710 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 ANO9A1A5B4 782 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 PLEKP08567 350 aaPredicted RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 PRPHP41219 470 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 KRT26Q7Z3Y9 468 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 SMCR8Q8TEV9 937 aaPredicted RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 CCDC47Q96A33 483 aaKnown RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 PURBQ96QR8 312 aaKnown RBP14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 TCP11L1Q9NUJ3 509 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 BARHL2Q9NY43 387 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 LRWD1Q9UFC0 647 aa14.78□□□□□ -0.04
SLC28A1-201ENST00000286749 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 LAD1O00515 517 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 ZNF263O14978 683 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 GNAQP50148 359 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 VAV2P52735 878 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 KIF5AQ12840 1032 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 SEMA3FQ13275 785 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 C12orf60Q5U649 245 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 DZIP1Q86YF9 867 aaKnown RBP14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 FAM114A1Q8IWE2 563 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 SECISBP2LQ93073 1101 aaKnown RBP14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 HPS3Q969F9 1004 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 HINFPQ9BQA5 517 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 CUEDC2Q9H467 287 aa14.77□□□□□ -0.04
SLC28A1-201ENST00000286749 OR52Z1P0C646 297 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 GOLGA8HP0CJ92 632 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms