RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 FEM1BQ9UK73 627 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
SPC25-201ENST00000282074 TLL1O43897 1013 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 B4GALT4O60513 344 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 GPR37L1O60883 481 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 FDX1P10109 184 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 ACTN1P12814 892 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 ERICH6BQ5W0A0 696 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 HLA-CQ95604 372 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 ARPP21Q9UBL0 812 aaPredicted RBP14.34□□□□□ -0.11
SPC25-201ENST00000282074 CLIP2Q9UDT6 1046 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 GNEQ9Y223 722 aaKnown RBP14.34□□□□□ -0.11
SPC25-201ENST00000282074 Q9Y3F1 56 aa14.34□□□□□ -0.11
SPC25-201ENST00000282074 GBF1Q92538 1859 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 CHD7Q9P2D1 2997 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 BAZ2AQ9UIF9 1905 aaKnown RBP14.33□□□□□ -0.12
SPC25-201ENST00000282074 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
SPC25-201ENST00000282074 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 RFXAPO00287 272 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 CA3P07451 260 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 IQSEC1Q6DN90 963 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 PHOSPHO2Q8TCD6 241 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 KIF1BPQ96EK5 621 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 SCLYQ96I15 445 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 ACAD9Q9H845 621 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 COG6Q9Y2V7 657 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 MCM3APO60318 1980 aa14.33□□□□□ -0.12
SPC25-201ENST00000282074 ASTN1O14525 1302 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 AGBL1Q96MI9 1066 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 SLC9A7Q96T83 725 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 ALDH8A1Q9H2A2 487 aaPredicted RBP14.32□□□□□ -0.12
SPC25-201ENST00000282074 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 CERS4Q9HA82 394 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 SYNPO2Q9UMS6 1093 aa14.32□□□□□ -0.12
SPC25-201ENST00000282074 MUC6Q6W4X9 2439 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 ZBED9Q6R2W3 1325 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 SMPD1P17405 629 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 RASA1P20936 1047 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
SPC25-201ENST00000282074 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 DEFB128Q7Z7B8 93 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 ARNTL2Q8WYA1 636 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 MKL1Q969V6 931 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 ZNF287Q9HBT7 754 aa14.31□□□□□ -0.12
SPC25-201ENST00000282074 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
SPC25-201ENST00000282074 RFC2P35250 354 aa14.3□□□□□ -0.12
SPC25-201ENST00000282074 PSMC6P62333 389 aa14.3□□□□□ -0.12
SPC25-201ENST00000282074 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
SPC25-201ENST00000282074 SBK1Q52WX2 424 aa14.3□□□□□ -0.12
SPC25-201ENST00000282074 RPAP2Q8IXW5 612 aaPredicted RBP14.3□□□□□ -0.12
SPC25-201ENST00000282074 ZNF444Q8N0Y2 327 aaPredicted RBP14.3□□□□□ -0.12
SPC25-201ENST00000282074 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
SPC25-201ENST00000282074 XIRP2A4UGR9 3374 aa14.3□□□□□ -0.12
SPC25-201ENST00000282074 SOWAHBA6NEL2 793 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 CYP2C9P11712 490 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 BMP3P12645 472 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 ATP5JP18859 108 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 RETREG2Q8NC44 543 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 GMCL1P1Q8NEA9 526 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 CHURC1Q8WUH1 139 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 VWCEQ96DN2 955 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 HAUS7Q99871 368 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 A1CFQ9NQ94 594 aaKnown RBP14.29□□□□□ -0.12
SPC25-201ENST00000282074 RNF146Q9NTX7 359 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 POLR3EQ9NVU0 708 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
SPC25-201ENST00000282074 TNKSO95271 1327 aa14.29□□□□□ -0.12
SPC25-201ENST00000282074 TRANK1O15050 2925 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 MINDY4BA8MYZ0 360 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 PI4K2BG5E9Z4 385 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 TTLL1O95922 423 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 RLBP1P12271 317 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 STAT2P52630 851 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 TAP1Q03518 808 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 TAPT1Q6NXT6 567 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 HERC6Q8IVU3 1022 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 STK11IPQ8N1F8 1099 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 FTOQ9C0B1 505 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPC25-201ENST00000282074 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
SPC25-201ENST00000282074 VTA1Q9NP79 307 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 GPHNQ9NQX3 736 aaPredicted RBP14.28□□□□□ -0.12
SPC25-201ENST00000282074 PDGFCQ9NRA1 345 aa14.28□□□□□ -0.12
SPC25-201ENST00000282074 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
SPC25-201ENST00000282074 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.12
SPC25-201ENST00000282074 EPOPA6NHQ4 379 aa14.27□□□□□ -0.12
SPC25-201ENST00000282074 TMEM232C9JQI7 657 aa14.27□□□□□ -0.12
SPC25-201ENST00000282074 RAB11FIP3O75154 756 aa14.27□□□□□ -0.12
SPC25-201ENST00000282074 HMMRO75330 724 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms