RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 NFU1Q9UMS0 254 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 SNX12Q9UMY4 172 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 RTL9Q8NET4 1388 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 STARD3NLO95772 234 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 DNM2P50570 870 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 KCNQ4P56696 695 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 PDE4DQ08499 809 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 STK4Q13043 487 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 KCNV1Q6PIU1 500 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 EHBP1Q8NDI1 1231 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 PIGBQ92521 554 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 CPVLQ9H3G5 476 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 DISC1Q9NRI5 854 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 RBM12Q9NTZ6 932 aaKnown RBP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 ADAMTS7Q9UKP4 1686 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 BMP15O95972 392 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 CYP2D6P10635 497 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 SCG2P13521 617 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 FGFR2P21802 821 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
COL8A1-202ENST00000273342 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 TMTC3Q6ZXV5 915 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
COL8A1-202ENST00000273342 ZIM3Q96PE6 472 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 SALL4Q9UJQ4 1053 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 PACSIN2Q9UNF0 486 aaPredicted RBP14.38□□□□□ -0.11
COL8A1-202ENST00000273342 BACH1O14867 736 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 HSF2BPO75031 334 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 TACC1O75410 805 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 HPDP32754 393 aaPredicted RBP14.38□□□□□ -0.11
COL8A1-202ENST00000273342 CARSP49589 748 aaKnown RBP14.38□□□□□ -0.11
COL8A1-202ENST00000273342 NNTQ13423 1086 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 DTHD1Q6ZMT9 781 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 OSBPL9Q96SU4 736 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 DUSP9Q99956 384 aaKnown RBP14.38□□□□□ -0.11
COL8A1-202ENST00000273342 SLC39A2Q9NP94 309 aa14.38□□□□□ -0.11
COL8A1-202ENST00000273342 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
COL8A1-202ENST00000273342 SHOX2O60902 331 aaPredicted RBP14.37□□□□□ -0.11
COL8A1-202ENST00000273342 SRGNP10124 158 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 GNAT2P19087 354 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 VAV2P52735 878 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 ASIC1P78348 528 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 RASSF7Q02833 373 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 ARID5AQ03989 594 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 C8orf74Q6P047 294 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 RRAGAQ7L523 313 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
COL8A1-202ENST00000273342 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 CNTNAP5Q8WYK1 1306 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 TTI2Q6NXR4 508 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 CCDC24Q8N4L8 307 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 OTUD6BQ8N6M0 293 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 RPGRIP1Q96KN7 1286 aa14.37□□□□□ -0.11
COL8A1-202ENST00000273342 KIAA0754O94854 1291 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 EEF1GP26641 437 aaKnown RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 ZBED6P86452 979 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 GUCY2DQ02846 1103 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 IQCEQ6IPM2 695 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 MYCBPQ99417 103 aaPredicted RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 NCAPGQ9BPX3 1015 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 KANSL2Q9H9L4 492 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 MYH7P12883 1935 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 MYH10P35580 1976 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 CCDC194A0A1B0GVG4 234 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 USO1O60763 962 aaKnown RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 ATP2C2O75185 946 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 GLI1P08151 1106 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 KIF11P52732 1056 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 TDRD12Q587J7 1177 aaKnown RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 DZIP3Q86Y13 1208 aaKnown RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 AMOTL1Q8IY63 956 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 RNPC3Q96LT9 517 aaKnown RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 UIMC1Q96RL1 719 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 PHRF1Q9P1Y6 1649 aaKnown RBP14.36□□□□□ -0.11
COL8A1-202ENST00000273342 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 A0A1W2PQC6 194 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 KLRC4O43908 158 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 MEA1Q16626 185 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 HAUS3Q68CZ6 603 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 CADPS2Q86UW7 1296 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 STIM2Q9P246 746 aa14.36□□□□□ -0.11
COL8A1-202ENST00000273342 LAMB4A4D0S4 1761 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 DDX60Q8IY21 1712 aaKnown RBP14.35□□□□□ -0.11
COL8A1-202ENST00000273342 OPA1O60313 960 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 FTCDO95954 541 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 BLIDQ8IZY5 108 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 TRIM58Q8NG06 486 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 TTYH3Q9C0H2 523 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms