RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
SYCP3-201ENST00000266743 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
SYCP3-201ENST00000266743 RIOK1Q9BRS2 568 aaKnown RBP11.93□□□□□ -0.5
SYCP3-201ENST00000266743 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
SYCP3-201ENST00000266743 HDAC5Q9UQL6 1122 aa11.93□□□□□ -0.5
SYCP3-201ENST00000266743 TMX2Q9Y320 296 aa11.93□□□□□ -0.5
SYCP3-201ENST00000266743 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 PRR33A8MZF0 331 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 WDR46O15213 610 aaKnown RBP11.92□□□□□ -0.5
SYCP3-201ENST00000266743 LPXNO60711 386 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 TMEM63BQ5T3F8 832 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 MAMDC4Q6UXC1 1216 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
SYCP3-201ENST00000266743 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 AGBL1Q96MI9 1066 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
SYCP3-201ENST00000266743 SPC25Q9HBM1 224 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
SYCP3-201ENST00000266743 FOCADQ5VW36 1801 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 DNAJC25-GNG10A0A024R161 153 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 CYP2D7A0A087X1C5 515 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 GNAI3P08754 354 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 CYP2C9P11712 490 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 EEF2P13639 858 aaKnown RBP11.91□□□□□ -0.5
SYCP3-201ENST00000266743 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
SYCP3-201ENST00000266743 SLFN5Q08AF3 891 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 OS9Q13438 667 aaPredicted RBP11.91□□□□□ -0.5
SYCP3-201ENST00000266743 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
SYCP3-201ENST00000266743 TMCO2Q7Z6W1 182 aaPredicted RBP11.91□□□□□ -0.5
SYCP3-201ENST00000266743 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 GJD3Q8N144 294 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 GBF1Q92538 1859 aa11.91□□□□□ -0.5
SYCP3-201ENST00000266743 TRANK1O15050 2925 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 E9PSI1 815 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 IL9P15248 144 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 ARMCX2Q7L311 632 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
SYCP3-201ENST00000266743 KATNBL1Q9H079 304 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
SYCP3-201ENST00000266743 TRMT13Q9NUP7 481 aaKnown RBP11.9□□□□□ -0.5
SYCP3-201ENST00000266743 MYH1P12882 1939 aa11.9□□□□□ -0.51
SYCP3-201ENST00000266743 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 PRKAB2O43741 272 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 BCAR3O75815 825 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 GNAI2P04899 355 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 CNTN2Q02246 1040 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 FAM178BQ8IXR5 827 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 MSL3Q8N5Y2 521 aaKnown RBP11.89□□□□□ -0.51
SYCP3-201ENST00000266743 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
SYCP3-201ENST00000266743 ZNF512BQ96KM6 892 aaPredicted RBP11.89□□□□□ -0.51
SYCP3-201ENST00000266743 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 RAVER2Q9HCJ3 691 aaKnown RBP11.89□□□□□ -0.51
SYCP3-201ENST00000266743 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
SYCP3-201ENST00000266743 GPR108Q9NPR9 543 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
SYCP3-201ENST00000266743 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
SYCP3-201ENST00000266743 WDFY4Q6ZS81 3184 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 DPYSL4O14531 572 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
SYCP3-201ENST00000266743 KCNA5P22460 613 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 TNFAIP2Q03169 654 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
SYCP3-201ENST00000266743 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 TLK2Q86UE8 772 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
SYCP3-201ENST00000266743 TEX13BQ9BXU2 312 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
SYCP3-201ENST00000266743 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 UBE2ZQ9H832 354 aaPredicted RBP11.88□□□□□ -0.51
SYCP3-201ENST00000266743 PDGFCQ9NRA1 345 aa11.88□□□□□ -0.51
SYCP3-201ENST00000266743 SURF6O75683 361 aaKnown RBP11.87□□□□□ -0.51
SYCP3-201ENST00000266743 SMPD1P17405 629 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 CDK8P49336 464 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 EEPD1Q7L9B9 569 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 HERC6Q8IVU3 1022 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 ANKRD35Q8N283 1001 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 SLF1Q9BQI6 1058 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
SYCP3-201ENST00000266743 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 ARMT1Q9H993 441 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 HOMER2Q9NSB8 354 aa11.87□□□□□ -0.51
SYCP3-201ENST00000266743 GNEQ9Y223 722 aaKnown RBP11.87□□□□□ -0.51
SYCP3-201ENST00000266743 ZNFX1Q9P2E3 1918 aaKnown RBP11.87□□□□□ -0.51
SYCP3-201ENST00000266743 PDE6AP16499 860 aa11.86□□□□□ -0.51
SYCP3-201ENST00000266743 COPB2P35606 906 aa11.86□□□□□ -0.51
SYCP3-201ENST00000266743 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
SYCP3-201ENST00000266743 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
SYCP3-201ENST00000266743 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
SYCP3-201ENST00000266743 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.86□□□□□ -0.51
SYCP3-201ENST00000266743 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms