RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 HEATR3Q7Z4Q2 680 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 IFT20Q8IY31 132 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 CSGALNACT2Q8N6G5 542 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 PRM3Q9NNZ6 103 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 SAP30BPQ9UHR5 308 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 EPN1Q9Y6I3 576 aaPredicted RBP12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 ERCC5P28715 1186 aaPredicted RBP12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 NELFBQ8WX92 580 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 BPIFA3Q9BQP9 254 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 MROH7-TTC4A0A0A0MT08 1334 aa12.82□□□□□ -0.36
CLSTN3-201ENST00000266546 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 ANKRD65E5RJM6 399 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 MAGEA9P43362 315 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 TNNI2P48788 182 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 NUP58Q9BVL2 599 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 TAOK3Q9H2K8 898 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 SWAP70Q9UH65 585 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 RBL2Q08999 1139 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 ICE2Q659A1 982 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 ENOX1Q8TC92 643 aaKnown RBP12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 PLEKHA4Q9H4M7 779 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 MYO1AQ9UBC5 1043 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 PAPPAQ13219 1627 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 TTC38Q5R3I4 469 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 BLZF1Q9H2G9 400 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 TAF6LQ9Y6J9 622 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 KCNJ6P48051 423 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 CABS1Q96KC9 395 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 GJA3Q9Y6H8 435 aa12.81□□□□□ -0.36
CLSTN3-201ENST00000266546 SALL1Q9NSC2 1324 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 NRAPQ86VF7 1730 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 ENC1O14682 589 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 NAA25Q14CX7 972 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 TMEM132AQ24JP5 1023 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 KIAA0753Q2KHM9 967 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 TMEM232C9JQI7 657 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 PAK2Q13177 524 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 KCNJ12Q14500 433 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 E2F4Q16254 413 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 DCP1AQ9NPI6 582 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 PPFIA4O75335 1185 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 MAGEA1P43355 309 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 TOGARAM2Q6ZUX3 1019 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 NSRP1Q9H0G5 558 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-201ENST00000266546 ORC4O43929 436 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 IFNAR1P17181 557 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 RSRC1Q96IZ7 334 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 HINFPQ9BQA5 517 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 LRRC27Q9C0I9 530 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 GOLGA8KD6RF30 607 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 ZMYND10O75800 440 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 ATP1A2P50993 1020 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 FBXL16Q8N461 479 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 ACRBPQ8NEB7 543 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 UBLCP1Q8WVY7 318 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 TOGARAM1Q9Y4F4 1720 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 GSTTP1A0A1W2PQM5 241 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 SRGNP10124 158 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 GNA11P29992 359 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 MORC3Q14149 939 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 FAM47AQ5JRC9 791 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 DGKHQ86XP1 1220 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 PANX2Q96RD6 677 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 C6orf50Q9HD87 102 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 GJB4Q9NTQ9 266 aa12.79□□□□□ -0.36
CLSTN3-201ENST00000266546 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms