RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 SYKP43405 635 aa27.84■■■□□ 2.05
R3HCC1-201ENST00000265806 TIGD1Q96MW7 591 aa27.84■■■□□ 2.05
R3HCC1-201ENST00000265806 CSRNP2Q9H175 543 aa27.84■■■□□ 2.05
R3HCC1-201ENST00000265806 TAF1DQ9H5J8 278 aaPredicted RBP27.84■■■□□ 2.05
R3HCC1-201ENST00000265806 GRPEL1Q9HAV7 217 aa27.84■■■□□ 2.05
R3HCC1-201ENST00000265806 EMILIN3Q9NT22 766 aa27.84■■■□□ 2.05
R3HCC1-201ENST00000265806 LAD1O00515 517 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 UBE2SQ16763 222 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 MCTP2Q6DN12 878 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 FBXO28Q9NVF7 368 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 FAM13BQ9NYF5 915 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 PHIPQ8WWQ0 1821 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 KCNH3Q9ULD8 1083 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 ZHX2Q9Y6X8 837 aa27.83■■■□□ 2.05
R3HCC1-201ENST00000265806 WDR90Q96KV7 1748 aa27.82■■■□□ 2.04
R3HCC1-201ENST00000265806 PPP1R12BO60237 982 aaPredicted RBP27.82■■■□□ 2.04
R3HCC1-201ENST00000265806 VCAM1P19320 739 aa27.82■■■□□ 2.04
R3HCC1-201ENST00000265806 USH1GQ495M9 461 aa27.82■■■□□ 2.04
R3HCC1-201ENST00000265806 PRPF38AQ8NAV1 312 aaKnown RBP27.82■■■□□ 2.04
R3HCC1-201ENST00000265806 C12orf42Q96LP6 360 aa27.82■■■□□ 2.04
R3HCC1-201ENST00000265806 POTECB2RU33 542 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 C19orf81C9J6K1 198 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 MEIS2O14770 477 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 MAP3K9P80192 1104 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 LETM2Q2VYF4 491 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 DLK2Q6UY11 383 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 SLF1Q9BQI6 1058 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 AP3B2Q13367 1082 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 SPECC1Q5M775 1068 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 PNMA8AQ86V59 439 aaPredicted RBP27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 CKAP2LQ8IYA6 745 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 PAPPA2Q9BXP8 1791 aa27.81■■■□□ 2.04
R3HCC1-201ENST00000265806 CCDC192P0DO97 292 aa27.8■■■□□ 2.04
R3HCC1-201ENST00000265806 PRPHP41219 470 aa27.8■■■□□ 2.04
R3HCC1-201ENST00000265806 PRKG1Q13976 671 aa27.8■■■□□ 2.04
R3HCC1-201ENST00000265806 SDF4Q9BRK5 362 aa27.8■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L15C9J2P7 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L13C9JLJ4 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L11C9JVI0 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L18D6R9N7 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L22D6RA61 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L17D6RBQ6 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L19D6RCP7 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L20D6RJB6 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 OPLAHO14841 1288 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 CCNT1O60563 726 aaKnown RBP27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L24Q0WX57 530 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 USP17L6PQ6QN14 398 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 RBSNQ9H1K0 784 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 TMEM60Q9H2L4 133 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 SNCAIPQ9Y6H5 919 aa27.79■■■□□ 2.04
R3HCC1-201ENST00000265806 VWA3AA6NCI4 1184 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 EDIL3O43854 480 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 DGKZQ13574 1117 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 VGLL4Q14135 290 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 CDCA5Q96FF9 252 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 AFG3L2Q9Y4W6 797 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 PIK3CDO00329 1044 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 NF2P35240 595 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 IL17AQ16552 155 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 CCDC174Q6PII3 467 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 TANGO6Q9C0B7 1094 aa27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 RPAP3Q9H6T3 665 aaPredicted RBP27.78■■■□□ 2.04
R3HCC1-201ENST00000265806 NEMFO60524 1076 aa27.77■■■□□ 2.04
R3HCC1-201ENST00000265806 FOSP01100 380 aaPredicted RBP27.77■■■□□ 2.04
R3HCC1-201ENST00000265806 LONP1P36776 959 aaKnown RBP27.77■■■□□ 2.04
R3HCC1-201ENST00000265806 IREB2P48200 963 aaKnown RBP27.77■■■□□ 2.04
R3HCC1-201ENST00000265806 ELOA2Q8IYF1 753 aaPredicted RBP27.77■■■□□ 2.04
R3HCC1-201ENST00000265806 PPP1R9AQ9ULJ8 1098 aa27.77■■■□□ 2.04
R3HCC1-201ENST00000265806 XRCC6P12956 609 aaKnown RBP eCLIP27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 EAPPQ56P03 285 aaPredicted RBP27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 PPP4R3AQ6IN85 833 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 USP49Q70CQ1 688 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 ANO3Q9BYT9 981 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 MRPL11Q9Y3B7 192 aaKnown RBP27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 CSADQ9Y600 493 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 SMCHD1A6NHR9 2005 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 ABCB11O95342 1321 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 ICAM1P05362 532 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 OR52Z1P0C646 297 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 FDX1P10109 184 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 TYRO3Q06418 890 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 DTHD1Q6ZMT9 781 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 LDHDQ86WU2 507 aa27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 RBM46Q8TBY0 533 aaKnown RBP27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 SYMPKQ92797 1274 aaKnown RBP27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 NAP1L4Q99733 375 aaKnown RBP27.76■■■□□ 2.03
R3HCC1-201ENST00000265806 OTOFQ9HC10 1997 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 FLOT1O75955 427 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 GCFC2P16383 781 aaKnown RBP27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 HMGCS2P54868 508 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 SH3D19Q5HYK7 790 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 KRBA2Q6ZNG9 492 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 EPSTI1Q96J88 318 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 SLC38A10Q9HBR0 1119 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 MYH7BA7E2Y1 1941 aa27.75■■■□□ 2.03
R3HCC1-201ENST00000265806 ZNF536O15090 1300 aa27.74■■■□□ 2.03
R3HCC1-201ENST00000265806 TAL1P17542 331 aaPredicted RBP27.74■■■□□ 2.03
R3HCC1-201ENST00000265806 USP11P51784 963 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms