RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SAMD9LQ8IVG5 1584 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 PFKFB2O60825 505 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 USP40Q9NVE5 1235 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 THRAP3Q9Y2W1 955 aaKnown RBP19.68■□□□□ 0.74
COL5A3-201ENST00000264828 M0QZ92 97 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 CASP14P31944 242 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 RCN2Q14257 317 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 SLC35F6Q8N357 371 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 NME8Q8N427 588 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 HAUS2Q9NVX0 235 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 CAPN9O14815 690 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 OR52Z1P0C646 297 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 CASP2P42575 452 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 BFSP1Q12934 665 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 CXorf38Q8TB03 319 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 SMYD2Q9NRG4 433 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 PCDHA12Q9UN75 941 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 TCP1P17987 556 aaKnown RBP19.67■□□□□ 0.74
COL5A3-201ENST00000264828 CMA1P23946 247 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 MMEL1Q495T6 779 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 KMT5BQ4FZB7 885 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 IFNL3Q8IZI9 196 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 ATP8A2Q9NTI2 1148 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 TYW1Q9NV66 732 aaKnown RBP19.67■□□□□ 0.74
COL5A3-201ENST00000264828 ANKFY1Q9P2R3 1169 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 ADAM9Q13443 819 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 ZNF148Q9UQR1 794 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 YEATS2Q9ULM3 1422 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 MGEA5O60502 916 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 SLC8A1P32418 973 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 IFT88Q13099 833 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 BIRC2Q13490 618 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 XKR9Q5GH70 373 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 SPOUT1Q5T280 376 aaKnown RBP19.67■□□□□ 0.74
COL5A3-201ENST00000264828 LARGE2Q8N3Y3 721 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL5A3-201ENST00000264828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL5A3-201ENST00000264828 PPME1Q9Y570 386 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 NEURL1BA8MQ27 555 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 SPATA1Q5VX52 437 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 RNF169Q8NCN4 708 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 CCDC127Q96BQ5 260 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 Q9H521 79 aa19.67■□□□□ 0.74
COL5A3-201ENST00000264828 EPN1Q9Y6I3 576 aaPredicted RBP19.67■□□□□ 0.74
COL5A3-201ENST00000264828 H7C1D1 291 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 GTPBP6O43824 516 aaPredicted RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 C2orf54Q08AI8 447 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 C4orf50Q6ZRC1 276 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 POMGNT1Q8WZA1 660 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 HAUS4Q9H6D7 363 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 BTBD18B2RXH4 712 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 COPB1P53618 953 aaKnown RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 MRPL46Q9H2W6 279 aaKnown RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 YWHAGP61981 247 aaKnown RBP eCLIP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 SESTD1Q86VW0 696 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 ERVV-2B6SEH9 535 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 SPATS2Q86XZ4 545 aaKnown RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 CERS3Q8IU89 383 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 MED4Q9NPJ6 270 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 FAF1Q9UNN5 650 aaPredicted RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 FAM135BQ49AJ0 1406 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 ADCY9O60503 1353 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 CNOT6LQ96LI5 555 aaKnown RBP19.66■□□□□ 0.74
COL5A3-201ENST00000264828 TRIM4Q9C037 500 aa19.66■□□□□ 0.74
COL5A3-201ENST00000264828 APBA3O96018 575 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 SETSIPP0DME0 302 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 FANCBQ8NB91 859 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 ZSWIM6Q9HCJ5 1215 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 EFCAB6Q5THR3 1501 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 TNNC2P02585 160 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 STMN1P16949 149 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 TRIM56Q9BRZ2 755 aaKnown RBP19.65■□□□□ 0.74
COL5A3-201ENST00000264828 SCRN1Q12765 414 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 MESDQ14696 234 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 HDAC11Q96DB2 347 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 PPP1R9AQ9ULJ8 1098 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 FAN1Q9Y2M0 1017 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 PASKQ96RG2 1323 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
COL5A3-201ENST00000264828 PIK3CAP42336 1068 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 ECE1P42892 770 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 RASIP1Q5U651 963 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 NEK8Q86SG6 692 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 MRFAP1L1Q96HT8 127 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 TNKSO95271 1327 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 SNX1Q13596 522 aa19.65■□□□□ 0.74
COL5A3-201ENST00000264828 XAB2Q9HCS7 855 aaKnown RBP19.65■□□□□ 0.74
COL5A3-201ENST00000264828 A0A087WWV3 80 aa19.64■□□□□ 0.74
COL5A3-201ENST00000264828 LTKP29376 864 aa19.64■□□□□ 0.74
COL5A3-201ENST00000264828 RBL2Q08999 1139 aa19.64■□□□□ 0.74
COL5A3-201ENST00000264828 ZKSCAN8Q15776 578 aaPredicted RBP19.64■□□□□ 0.74
COL5A3-201ENST00000264828 ARMCX5Q6P1M9 558 aa19.64■□□□□ 0.74
COL5A3-201ENST00000264828 FAM178BQ8IXR5 827 aa19.64■□□□□ 0.74
COL5A3-201ENST00000264828 LRGUKQ96M69 825 aa19.64■□□□□ 0.74
COL5A3-201ENST00000264828 H7C0C1 242 aa19.64■□□□□ 0.73
COL5A3-201ENST00000264828 OATP04181 439 aa19.64■□□□□ 0.73
COL5A3-201ENST00000264828 ATP5OP48047 213 aa19.64■□□□□ 0.73
COL5A3-201ENST00000264828 CTSWP56202 376 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms