RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CD209Q9NNX6 404 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 HPSEQ9Y251 543 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 CD44P16070 742 aaKnown RBP22.05■■□□□ 1.12
CSPG5-201ENST00000264723 PDE6BP35913 854 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 RNF187Q5TA31 235 aaPredicted RBP22.05■■□□□ 1.12
CSPG5-201ENST00000264723 NEK8Q86SG6 692 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 BRD3Q15059 726 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 CERKLQ49MI3 558 aaPredicted RBP22.05■■□□□ 1.12
CSPG5-201ENST00000264723 PSTPIP2Q9H939 334 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 SERPINB13Q9UIV8 391 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 WDR19Q8NEZ3 1342 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 ATP2C2O75185 946 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 GDF11O95390 407 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 TRIM14Q14142 442 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 GSPT2Q8IYD1 628 aaKnown RBP22.05■■□□□ 1.12
CSPG5-201ENST00000264723 KIFC2Q96AC6 838 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 LZTS2Q9BRK4 669 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 GOPCQ9HD26 462 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 PRDM4Q9UKN5 801 aa22.05■■□□□ 1.12
CSPG5-201ENST00000264723 CDK8P49336 464 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 TCP11X2Q5H9J9 407 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 ADGRA1Q86SQ6 560 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 TAX1BP1Q86VP1 789 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 NRXN3Q9Y4C0 1643 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 FAM13AO94988 1023 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 BMP6P22004 513 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 SETQ01105 290 aaPredicted RBP22.04■■□□□ 1.12
CSPG5-201ENST00000264723 DLGAP5Q15398 846 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 CNOT6LQ96LI5 555 aaKnown RBP22.04■■□□□ 1.12
CSPG5-201ENST00000264723 SLC4A9Q96Q91 983 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 SHTN1A0MZ66 631 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 OR52Z1P0C646 297 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 BRIP1Q9BX63 1249 aa22.04■■□□□ 1.12
CSPG5-201ENST00000264723 A0A0U1RQJ8 604 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 NDUFA10O95299 355 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 ATRIPQ8WXE1 791 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 PANX2Q96RD6 677 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 CCDC113Q9H0I3 377 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 STK36Q9NRP7 1315 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 PLCG1P19174 1290 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 ZNF658Q5TYW1 1059 aaPredicted RBP22.03■■□□□ 1.12
CSPG5-201ENST00000264723 POLD4Q9HCU8 107 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 TTC26A0AVF1 554 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 FOXP2O15409 715 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 ACTN4O43707 911 aaKnown RBP22.03■■□□□ 1.12
CSPG5-201ENST00000264723 PCP11498 1178 aaKnown RBP22.03■■□□□ 1.12
CSPG5-201ENST00000264723 PCDHA1Q9Y5I3 950 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
CSPG5-201ENST00000264723 CERS3Q8IU89 383 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 CCDC51Q96ER9 411 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 PIK3C2AO00443 1686 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 PRR16Q569H4 304 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 CNNM4Q6P4Q7 775 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 CCDC65Q8IXS2 484 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 ABHD10Q9NUJ1 306 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 PCDHA12Q9UN75 941 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 HSF2BPO75031 334 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 DNM2P50570 870 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 ICA1Q05084 483 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 TBCKQ8TEA7 893 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 MRFAP1Q9Y605 127 aa22.02■■□□□ 1.12
CSPG5-201ENST00000264723 CYP4A11Q02928 519 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 NSUN4Q96CB9 384 aaKnown RBP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 PCDHA4Q9UN74 947 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 RGPD8O14715 1765 aaPredicted RBP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 RAD17O75943 681 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 LONP1P36776 959 aaKnown RBP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 SLFN13Q68D06 897 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 ZNF579Q8NAF0 562 aaKnown RBP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 SNAP25P60880 206 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 NR1I3Q14994 352 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 KLHL7Q8IXQ5 586 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 ADAM21Q9UKJ8 722 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 CCDC151A5D8V7 595 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 SMCR8Q8TEV9 937 aaPredicted RBP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 GJD4Q96KN9 370 aaPredicted RBP22.01■■□□□ 1.11
CSPG5-201ENST00000264723 KANSL2Q9H9L4 492 aa22.01■■□□□ 1.11
CSPG5-201ENST00000264723 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 SLC7A5Q01650 507 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 WHAMMP3Q1A5X7 153 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 AFAP1L1Q8TED9 768 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 TMEM47Q9BQJ4 181 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 HAUS4Q9H6D7 363 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 EVX2Q03828 476 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 C2orf54Q08AI8 447 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 L2HGDHQ9H9P8 463 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 RWDD2AQ9UIY3 292 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 UBXN2AP68543 259 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 NSMFQ6X4W1 530 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 BICD1Q96G01 975 aa22■■□□□ 1.11
CSPG5-201ENST00000264723 UBE2SQ16763 222 aa21.99■■□□□ 1.11
CSPG5-201ENST00000264723 KRT26Q7Z3Y9 468 aa21.99■■□□□ 1.11
CSPG5-201ENST00000264723 MICALL1Q8N3F8 863 aa21.99■■□□□ 1.11
CSPG5-201ENST00000264723 ARHGEF10LQ9HCE6 1279 aa21.99■■□□□ 1.11
CSPG5-201ENST00000264723 DISC1Q9NRI5 854 aa21.99■■□□□ 1.11
CSPG5-201ENST00000264723 ADD3Q9UEY8 706 aaKnown RBP21.99■■□□□ 1.11
CSPG5-201ENST00000264723 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
CSPG5-201ENST00000264723 GPSM2P81274 684 aa21.99■■□□□ 1.11
CSPG5-201ENST00000264723 CETN1Q12798 172 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms