RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PTPREP23469 700 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 COL13A1Q5TAT6 717 aaPredicted RBP21.24■□□□□ 0.99
SDF4-201ENST00000263741 RRP36Q96EU6 259 aaKnown RBP21.24■□□□□ 0.99
SDF4-201ENST00000263741 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
SDF4-201ENST00000263741 SRRDQ9UH36 339 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 PGK2P07205 417 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 ADORA2AP29274 412 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 MMP19Q99542 508 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 GJD2Q9UKL4 321 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 PTCH2Q9Y6C5 1203 aa21.24■□□□□ 0.99
SDF4-201ENST00000263741 CYP2B6P20813 491 aa21.23■□□□□ 0.99
SDF4-201ENST00000263741 ST3GAL1Q11201 340 aa21.23■□□□□ 0.99
SDF4-201ENST00000263741 GRB14Q14449 540 aa21.23■□□□□ 0.99
SDF4-201ENST00000263741 NTRK3Q16288 839 aa21.23■□□□□ 0.99
SDF4-201ENST00000263741 GPKOWQ92917 476 aaPredicted RBP eCLIP21.23■□□□□ 0.99
SDF4-201ENST00000263741 ACAD9Q9H845 621 aa21.23■□□□□ 0.99
SDF4-201ENST00000263741 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
SDF4-201ENST00000263741 PNMA6FA0A0J9YX94 578 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 PFKFB2O60825 505 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 FCER1AP12319 257 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 MORN1Q5T089 497 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 CLEC4DQ8WXI8 215 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 AMNQ9BXJ7 453 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 V9GY48 417 aaPredicted RBP21.22■□□□□ 0.99
SDF4-201ENST00000263741 BRCA2P51587 3418 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 CCDC196A0A1B0GTZ2 297 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 NSMFQ6X4W1 530 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 CHST13Q8NET6 341 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 NUDT12Q9BQG2 462 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 A1CFQ9NQ94 594 aaKnown RBP21.22■□□□□ 0.99
SDF4-201ENST00000263741 PCDHA1Q9Y5I3 950 aa21.22■□□□□ 0.99
SDF4-201ENST00000263741 SMARCA1P28370 1054 aa21.21■□□□□ 0.99
SDF4-201ENST00000263741 COPB2P35606 906 aa21.21■□□□□ 0.99
SDF4-201ENST00000263741 KCTD2Q14681 263 aa21.21■□□□□ 0.99
SDF4-201ENST00000263741 PURBQ96QR8 312 aaKnown RBP21.21■□□□□ 0.99
SDF4-201ENST00000263741 SLC26A6Q9BXS9 759 aa21.21■□□□□ 0.99
SDF4-201ENST00000263741 LIMCH1Q9UPQ0 1083 aa21.21■□□□□ 0.99
SDF4-201ENST00000263741 PTPN22Q9Y2R2 807 aa21.21■□□□□ 0.99
SDF4-201ENST00000263741 SLC15A5A6NIM6 579 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 CPLX1O14810 134 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 ST18O60284 1047 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 COBLO75128 1261 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 ELNP15502 786 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 ARHGEF6Q15052 776 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 SLC30A10Q6XR72 485 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 HEATR3Q7Z4Q2 680 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 ANKRD35Q8N283 1001 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 SOCS4Q8WXH5 440 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 TBC1D5Q92609 795 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 GTF3C6Q969F1 213 aa21.2■□□□□ 0.99
SDF4-201ENST00000263741 OPLAHO14841 1288 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 MAP2K5Q13163 448 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 PPP2R5BQ15173 497 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 CCL14Q16627 93 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 TKFCQ3LXA3 575 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 NPLOC4Q8TAT6 608 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 RAET1EQ8TD07 263 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 USP6NLQ92738 828 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 ABCB11O95342 1321 aa21.2■□□□□ 0.98
SDF4-201ENST00000263741 GNRH1P01148 92 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 HOXD10P28358 340 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 WWC2Q6AWC2 1192 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 MCOLN1Q9GZU1 580 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 FBXO40Q9UH90 709 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 LRRC37A2A6NM11 1700 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 PTPDC1A2A3K4 754 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 CTDNEP1O95476 244 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 IFNAR1P17181 557 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 CCDC83Q8IWF9 413 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 DDX11Q96FC9 970 aa21.19■□□□□ 0.98
SDF4-201ENST00000263741 DDX49Q9Y6V7 483 aaKnown RBP21.19■□□□□ 0.98
SDF4-201ENST00000263741 STRNO43815 780 aa21.18■□□□□ 0.98
SDF4-201ENST00000263741 RGS2P41220 211 aa21.18■□□□□ 0.98
SDF4-201ENST00000263741 CNTN2Q02246 1040 aa21.18■□□□□ 0.98
SDF4-201ENST00000263741 TYW1BQ6NUM6 668 aa21.18■□□□□ 0.98
SDF4-201ENST00000263741 DPP9Q86TI2 863 aa21.18■□□□□ 0.98
SDF4-201ENST00000263741 SH3TC2Q8TF17 1288 aa21.18■□□□□ 0.98
SDF4-201ENST00000263741 CALML3P27482 149 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 BAATQ14032 418 aaPredicted RBP21.17■□□□□ 0.98
SDF4-201ENST00000263741 APBA2Q99767 749 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 CYP39A1Q9NYL5 469 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 FLRT1Q9NZU1 646 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 PKN1Q16512 942 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 ABRAQ8N0Z2 381 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 TRIB2Q92519 343 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 AIFM3Q96NN9 605 aa21.17■□□□□ 0.98
SDF4-201ENST00000263741 MRPL11Q9Y3B7 192 aaKnown RBP21.17■□□□□ 0.98
SDF4-201ENST00000263741 ADCY3O60266 1144 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 JAK2O60674 1132 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 FBXO46Q6PJ61 603 aaPredicted RBP21.16■□□□□ 0.98
SDF4-201ENST00000263741 RNF207Q6ZRF8 634 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 FGD4Q96M96 766 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 DNAJC25-GNG10A0A024R161 153 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 CFBP00751 764 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 MYCP01106 439 aaPredicted RBP21.16■□□□□ 0.98
SDF4-201ENST00000263741 HOXA13P31271 388 aaPredicted RBP21.16■□□□□ 0.98
SDF4-201ENST00000263741 RPS6P62753 249 aaKnown RBP21.16■□□□□ 0.98
SDF4-201ENST00000263741 TRIM32Q13049 653 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 RNF26Q9BY78 433 aaPredicted RBP21.16■□□□□ 0.98
SDF4-201ENST00000263741 PNMA2Q9UL42 364 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms