RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PFKFB2O60825 505 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 NEK8Q86SG6 692 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 UBAP1LF5GYI3 381 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 TCP10Q12799 353 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 MMEL1Q495T6 779 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 CCDC93Q567U6 631 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 SPECC1L-ADORA2AF8WAN1 911 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 DDAH1O94760 285 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 ZBTB8OSQ8IWT0 167 aa19.08■□□□□ 0.64
NOTCH3-201ENST00000263388 PHEXP78562 749 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 OTUD7BQ6GQQ9 843 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 SERPINB6P35237 376 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 IL9RQ01113 521 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 DIXDC1Q155Q3 683 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 SLC5A4Q9NY91 659 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 CACNA1FO60840 1977 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 K7ENM7 598 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 PFDN1O60925 122 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 NDUFA8P51970 172 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 TACO1Q9BSH4 297 aaKnown RBP19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 TPX2Q9ULW0 747 aaKnown RBP19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 PDZD8Q8NEN9 1154 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 STAMQ92783 540 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 SCYL1Q96KG9 808 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 FAM81BQ96LP2 452 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 PER1O15534 1290 aaPredicted RBP19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 hCG_1642624A0A1W2PR95 340 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 RNASELQ05823 741 aaKnown RBP19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 AOC3Q16853 763 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 C10orf76Q5T2E6 689 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 RDH13Q8NBN7 331 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 TRIM56Q9BRZ2 755 aaKnown RBP19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 PPP1R9AQ9ULJ8 1098 aa19.07■□□□□ 0.64
NOTCH3-201ENST00000263388 ABCC4O15439 1325 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 MLH3Q9UHC1 1453 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 BAG2O95816 211 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 TNFAIP1Q13829 316 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 CCDC68Q9H2F9 335 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 LRMPQ12912 555 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 BUB1O43683 1085 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 ABCD1P33897 745 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 SCG2P13521 617 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 RETREG2Q8NC44 543 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 PIK3CAP42336 1068 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 PRPSAP1Q14558 356 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 MAPKAPK5Q8IW41 473 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 ZC4H2Q9NQZ6 224 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 ADGRL2O95490 1459 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 SESN3P58005 492 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 BPIFB4P59827 614 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 TRIM11Q96F44 468 aa19.06■□□□□ 0.64
NOTCH3-201ENST00000263388 PHLPP2Q6ZVD8 1323 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 PDCD7Q8N8D1 485 aaKnown RBP19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 GLG1Q92896 1179 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 SPC25Q9HBM1 224 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 EXOC3L4Q17RC7 722 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 MED10Q9BTT4 135 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 RNF8O76064 485 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 INHBAP08476 426 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 PPARDQ03181 441 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 BIRC2Q13490 618 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 FANCLQ9NW38 375 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 PTGDRQ13258 359 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 MFSD14BQ5SR56 506 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 TRIM42Q8IWZ5 723 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 CCDC124Q96CT7 223 aaKnown RBP19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 AK8Q96MA6 479 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 ZNF710Q8N1W2 664 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 ADPGKQ9BRR6 497 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 RTEL1Q9NZ71 1219 aa19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 MRPL11Q9Y3B7 192 aaKnown RBP19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.05■□□□□ 0.64
NOTCH3-201ENST00000263388 OATP04181 439 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 MCF2L2Q86YR7 1114 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 ATP8B1O43520 1251 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 ARMC9Q7Z3E5 817 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 PPP1R13BQ96KQ4 1090 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 LRRD1A4D1F6 860 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 FANCBQ8NB91 859 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 POMGNT1Q8WZA1 660 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 SEPT8Q92599 483 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 ATP6V1E1P36543 226 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 EEF1GP26641 437 aaKnown RBP19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 GUCY2DQ02846 1103 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 FOXP1Q9H334 677 aaPredicted RBP19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 LRGUKQ96M69 825 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 NDUFB9Q9Y6M9 179 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 ERVV-2B6SEH9 535 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 PDE11AQ9HCR9 933 aa19.04■□□□□ 0.64
NOTCH3-201ENST00000263388 SF3A3Q12874 501 aaKnown RBP eCLIP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 PPP1R2P3Q6NXS1 205 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 IFNL3Q8IZI9 196 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 CCDC197Q8NCU1 140 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 AS3MTQ9HBK9 375 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 A6NJR5 290 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 HOXA7P31268 230 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms