RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RAB17Q9H0T7 212 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 L1RE1Q9UN81 338 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 CCDC160A6NGH7 325 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 ADD2P35612 726 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 LONP1P36776 959 aaKnown RBP17.86■□□□□ 0.45
SREBF1-201ENST00000261646 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-201ENST00000261646 AATFQ9NY61 560 aaKnown RBP eCLIP17.86■□□□□ 0.451e-7■□□□□ 8.1
SREBF1-201ENST00000261646 TRIM10Q9UDY6 481 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 PRKAB2O43741 272 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 ABCB4P21439 1286 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 KIF11P52732 1056 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 CUL4BQ13620 913 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 P2RX5Q93086 422 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 PCDHA13Q9Y5I0 950 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 IKBKGQ9Y6K9 419 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 ZC3H13Q5T200 1668 aaKnown RBP17.86■□□□□ 0.45
SREBF1-201ENST00000261646 RPL13P26373 211 aaKnown RBP17.86■□□□□ 0.45
SREBF1-201ENST00000261646 GBP1P32455 592 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 LIFRP42702 1097 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 TMEM132AQ24JP5 1023 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 CCDC105Q8IYK2 499 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 SH2D3CQ8N5H7 860 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 HNRNPLLQ8WVV9 542 aaKnown RBP17.86■□□□□ 0.45
SREBF1-201ENST00000261646 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
SREBF1-201ENST00000261646 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-201ENST00000261646 IRAK1P51617 712 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 OXER1Q8TDS5 423 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ACTR5Q9H9F9 607 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-201ENST00000261646 PLCB1Q9NQ66 1216 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 INTS9Q9NV88 658 aaKnown RBP17.85■□□□□ 0.45
SREBF1-201ENST00000261646 A0A1B0GTH6 734 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 PDE8AO60658 829 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 PLCB3Q01970 1234 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 DDB1Q16531 1140 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 CCDC38Q502W7 563 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 AP1ARQ63HQ0 302 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ARHGEF2Q92974 986 aaKnown RBP17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ZNF219Q9P2Y4 722 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ASIC3Q9UHC3 531 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ATP8A1Q9Y2Q0 1164 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 CD2APQ9Y5K6 639 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 MYOM1P52179 1685 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 C6orf229H3BNL8 230 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ZNF185O15231 689 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 TSNAXIP1Q2TAA8 658 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 LRRC31Q6UY01 552 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 RASGRP2Q7LDG7 609 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 TBC1D10CQ8IV04 446 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 KSR1Q8IVT5 923 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 U2AF1L4Q8WU68 220 aaKnown RBP17.85■□□□□ 0.45
SREBF1-201ENST00000261646 AMFRQ9UKV5 643 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 DIP2CQ9Y2E4 1556 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 KIAA1210Q9ULL0 1709 aa17.85■□□□□ 0.45
SREBF1-201ENST00000261646 ATP5DP30049 168 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 FAM133BQ5BKY9 247 aaKnown RBP17.84■□□□□ 0.45
SREBF1-201ENST00000261646 TRIM65Q6PJ69 517 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 HOMER3Q9NSC5 361 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 CTTNBP2NLQ9P2B4 639 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-201ENST00000261646 MROH7-TTC4A0A0A0MT08 1334 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 TFAP4Q01664 338 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 GUCY1A3Q02108 690 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 NR1I3Q14994 352 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 CROCCP2Q86T23 111 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 MLXIPQ9HAP2 919 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 SPATS2LQ9NUQ6 558 aaKnown RBP17.84■□□□□ 0.45
SREBF1-201ENST00000261646 USP49Q70CQ1 688 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 KRT25Q7Z3Z0 450 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 KCNB2Q92953 911 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 CUL5Q93034 780 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 STMN2Q93045 179 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 DHTKD1Q96HY7 919 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-201ENST00000261646 HOMER2Q9NSB8 354 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 USP31Q70CQ4 1352 aa17.84■□□□□ 0.45
SREBF1-201ENST00000261646 ZRANB2O95218 330 aaKnown RBP eCLIP17.83■□□□□ 0.453e-7■■■□□ 14.8
SREBF1-201ENST00000261646 DHX9Q08211 1270 aaKnown RBP17.83■□□□□ 0.45
SREBF1-201ENST00000261646 SYCE1Q8N0S2 351 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 VIPAS39Q9H9C1 493 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 ANO9A1A5B4 782 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 EPB41P11171 864 aaKnown RBP17.83■□□□□ 0.45
SREBF1-201ENST00000261646 STX2P32856 288 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 GYG1P46976 350 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 KCNQ4P56696 695 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 NFRKBQ6P4R8 1299 aa17.83■□□□□ 0.45
SREBF1-201ENST00000261646 SMCR8Q8TEV9 937 aaPredicted RBP17.83■□□□□ 0.45
SREBF1-201ENST00000261646 IQCGQ9H095 443 aaKnown RBP17.83■□□□□ 0.45
SREBF1-201ENST00000261646 ZNF609O15014 1411 aa17.83■□□□□ 0.44
SREBF1-201ENST00000261646 HMGB1P1B2RPK0 211 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-201ENST00000261646 PLS1Q14651 629 aa17.83■□□□□ 0.44
SREBF1-201ENST00000261646 TBC1D1Q86TI0 1168 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-201ENST00000261646 MYOCDQ8IZQ8 938 aa17.83■□□□□ 0.44
SREBF1-201ENST00000261646 RNF10Q8N5U6 811 aaKnown RBP17.83■□□□□ 0.44
SREBF1-201ENST00000261646 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.44
SREBF1-201ENST00000261646 HPCAL4Q9UM19 191 aa17.83■□□□□ 0.44
SREBF1-201ENST00000261646 PLAAQ9Y263 795 aa17.83■□□□□ 0.44
SREBF1-201ENST00000261646 ZBTB1Q9Y2K1 713 aa17.83■□□□□ 0.44
SREBF1-201ENST00000261646 CCDC169A6NNP5 214 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms