RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FBXO18Q8NFZ0 1043 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 PHF20Q9BVI0 1012 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 MOV10L1Q9BXT6 1211 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 HOMER2Q9NSB8 354 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 MORF4L1Q9UBU8 362 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 ABCB11O95342 1321 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 OPLAHO14841 1288 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 XBP1P17861 261 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 PDCP20941 246 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 TRAF1Q13077 416 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 NPY5RQ15761 445 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 FAM110CQ1W6H9 321 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 MUM1L1Q5H9M0 696 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 PPP1R18Q6NYC8 613 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 RIOX2Q8IUF8 465 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 GPRC5AQ8NFJ5 357 aa18.19■□□□□ 0.5
CCDC90B-201ENST00000260054 ADAMTS3O15072 1205 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 BCRP11274 1271 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 PKP1Q13835 747 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 TRIM29Q14134 588 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 C17orf99Q6UX52 265 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 CCDC148Q8NFR7 591 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 CCDC12Q8WUD4 166 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 CLEC4DQ8WXI8 215 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 TRERF1Q96PN7 1200 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 ZMYND12Q9H0C1 365 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 R3HDMLQ9H3Y0 253 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 RNF146Q9NTX7 359 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 ESYT2A0FGR8 921 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 SMCO2A6NFE2 343 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 NFIBO00712 420 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 MMP1P03956 469 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 NLRP5P59047 1200 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 MRPL11Q9Y3B7 192 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-201ENST00000260054 H3BQV1 296 aa18.17■□□□□ 0.5
CCDC90B-201ENST00000260054 STX6O43752 255 aa18.17■□□□□ 0.5
CCDC90B-201ENST00000260054 TKFCQ3LXA3 575 aa18.17■□□□□ 0.5
CCDC90B-201ENST00000260054 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
CCDC90B-201ENST00000260054 FAM177A1Q8N128 213 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-201ENST00000260054 PORCNQ9H237 461 aa18.17■□□□□ 0.5
CCDC90B-201ENST00000260054 VPS37CA5D8V6 355 aaPredicted RBP18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 ERCC3P19447 782 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 NCAPG2Q86XI2 1143 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 DNAJC5GQ8N7S2 189 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 PSTPIP2Q9H939 334 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 C6orf50Q9HD87 102 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 MTMR6Q9Y217 621 aa18.16■□□□□ 0.5
CCDC90B-201ENST00000260054 TRPA1O75762 1119 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 SLC25A27O95847 323 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 ADCY7P51828 1080 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 RGS22Q8NE09 1264 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 CHST13Q8NET6 341 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 OXER1Q8TDS5 423 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 CFHR5Q9BXR6 569 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 ACAD9Q9H845 621 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 EFCC1Q9HA90 598 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 RIC8AQ9NPQ8 531 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 PCDHA4Q9UN74 947 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 MEIS2O14770 477 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 CALML3P27482 149 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 GNA11P29992 359 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 CCNA1P78396 465 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 USP17L6PQ6QN14 398 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 DAGLBQ8NCG7 672 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 SHCBP1Q8NEM2 672 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 CUL5Q93034 780 aa18.15■□□□□ 0.5
CCDC90B-201ENST00000260054 BTBD18B2RXH4 712 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 M0R2N6 131 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 CFBP00751 764 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 COPB2P35606 906 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 NR5A1Q13285 461 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 UBE2SQ16763 222 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 GALNT17Q6IS24 598 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 BLIDQ8IZY5 108 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 RASGRP4Q8TDF6 673 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 FBXO40Q9UH90 709 aa18.14■□□□□ 0.49
CCDC90B-201ENST00000260054 KIF28PB7ZC32 967 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 HOXA13P31271 388 aaPredicted RBP18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 KRT2P35908 639 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 MRPL12P52815 198 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 GHRHRQ02643 423 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 NSMFQ6X4W1 530 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 MCF2L2Q86YR7 1114 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 MROH8Q9H579 483 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 A1CFQ9NQ94 594 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 ZDHHC9Q9Y397 364 aa18.13■□□□□ 0.49
CCDC90B-201ENST00000260054 PIK3CDO00329 1044 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 CLK2P49760 499 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 HSD17B4P51659 736 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 SAFBQ15424 915 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 MCTP1Q6DN14 999 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 SLC30A10Q6XR72 485 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms