RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 MFAP3LO75121 409 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
PDE6B-201ENST00000255622 GCKP35557 465 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 GET4Q7L5D6 327 aaPredicted RBP12.65□□□□□ -0.38
PDE6B-201ENST00000255622 MYLK4Q86YV6 388 aaPredicted RBP12.65□□□□□ -0.38
PDE6B-201ENST00000255622 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 BMP15O95972 392 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 CCDC175P0C221 793 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 DZIP1Q86YF9 867 aaKnown RBP12.64□□□□□ -0.39
PDE6B-201ENST00000255622 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
PDE6B-201ENST00000255622 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 SH3GL3Q99963 347 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 CPVLQ9H3G5 476 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 ATP8A2Q9NTI2 1148 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 PCP11498 1178 aaKnown RBP12.64□□□□□ -0.39
PDE6B-201ENST00000255622 PLA2G4AP47712 749 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 FOXR1Q6PIV2 292 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
PDE6B-201ENST00000255622 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 ARPP21Q9UBL0 812 aaPredicted RBP12.64□□□□□ -0.39
PDE6B-201ENST00000255622 MYH8P13535 1937 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 TRAF1Q13077 416 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 C4orf32Q8N8J7 132 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 PNMA1Q8ND90 353 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
PDE6B-201ENST00000255622 AHDC1Q5TGY3 1603 aaPredicted RBP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 GOLGA6L9A6NEM1 432 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 N4BP3O15049 544 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 ZRANB2O95218 330 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 ELF1P32519 619 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 BLIDQ8IZY5 108 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 EEF2KMTQ96G04 330 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 SEMA3EO15041 775 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 PYGLP06737 847 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 NF2P35240 595 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 TMCO3Q6UWJ1 677 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 TMEM60Q9H2L4 133 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 GNPATO15228 680 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 RPN1P04843 607 aaKnown RBP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 OAS2P29728 719 aaKnown RBP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 PRCPP42785 496 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 USP5P45974 858 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 RWDD2BP57060 319 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 ERVK-24P63145 666 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 PAK1Q13153 545 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 FILIP1LQ4L180 1135 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 ZBTB10Q96DT7 871 aa12.63□□□□□ -0.39
PDE6B-201ENST00000255622 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
PDE6B-201ENST00000255622 ANKRD33BA6NCL7 494 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 TMCO5BA8MYB1 307 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 CYTH3O43739 400 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 SASH3O75995 380 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 PMS1P54277 932 aaKnown RBP12.62□□□□□ -0.39
PDE6B-201ENST00000255622 INF2Q27J81 1249 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 TEX11Q8IYF3 940 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
PDE6B-201ENST00000255622 KCNJ18B7U540 433 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
PDE6B-201ENST00000255622 TM4SF1P30408 202 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 ACTN2P35609 894 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 STAT6P42226 847 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 USP4Q13107 963 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 KCNJ12Q14500 433 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 NAALADL2Q58DX5 795 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 RASSF8Q8NHQ8 419 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
PDE6B-201ENST00000255622 RDXP35241 583 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 NFIXQ14938 502 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 SBK1Q52WX2 424 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 TCP11X2Q5H9J9 407 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 RSRC2Q7L4I2 434 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 KIRREL3Q8IZU9 778 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 RWDD2AQ9UIY3 292 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 PCDHA4Q9UN74 947 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms