RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 AKAP17AQ02040 695 aaKnown RBP16.29■□□□□ 0.2
VPS25-201ENST00000253794 PLS1Q14651 629 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 GPR142Q7Z601 462 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
VPS25-201ENST00000253794 TRERF1Q96PN7 1200 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 SH3GLB2Q9NR46 395 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 RNF146Q9NTX7 359 aa16.29■□□□□ 0.2
VPS25-201ENST00000253794 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
VPS25-201ENST00000253794 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 STXBP3O00186 592 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 OPLAHO14841 1288 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 FOXN1O15353 648 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 JAK2O60674 1132 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 GNRH1P01148 92 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 ALAS1P13196 640 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 CTGFP29279 349 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 WASF1Q92558 559 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 ERO1AQ96HE7 468 aa16.28■□□□□ 0.2
VPS25-201ENST00000253794 MAP3K20Q9NYL2 800 aaKnown RBP16.28■□□□□ 0.2
VPS25-201ENST00000253794 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
VPS25-201ENST00000253794 PTPREP23469 700 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 CTCFP49711 727 aaPredicted RBP16.27■□□□□ 0.2
VPS25-201ENST00000253794 FCGRTP55899 365 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 GRB14Q14449 540 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 KIF22Q14807 665 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 USH1GQ495M9 461 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 MUM1L1Q5H9M0 696 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 MORN1Q5T089 497 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 TYW1BQ6NUM6 668 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 USP6NLQ92738 828 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 COA7Q96BR5 231 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
VPS25-201ENST00000253794 ORC3Q9UBD5 711 aaPredicted RBP16.27■□□□□ 0.2
VPS25-201ENST00000253794 MYH6P13533 1939 aa16.27■□□□□ 0.19
VPS25-201ENST00000253794 PFASO15067 1338 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 DNAJC25-GNG10A0A024R161 153 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 SLC15A5A6NIM6 579 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 NFIBO00712 420 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 HSD17B4P51659 736 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 CAP1Q01518 475 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
VPS25-201ENST00000253794 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
VPS25-201ENST00000253794 SHISA4Q96DD7 197 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 ZMYND12Q9H0C1 365 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
VPS25-201ENST00000253794 SMCHD1A6NHR9 2005 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 HOXC6P09630 235 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 FCER1AP12319 257 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 TAL1P17542 331 aaPredicted RBP16.25■□□□□ 0.19
VPS25-201ENST00000253794 PSMC4P43686 418 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 ARHGEF6Q15052 776 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
VPS25-201ENST00000253794 CCDC148Q8NFR7 591 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 SOCS4Q8WXH5 440 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 ARHGAP39Q9C0H5 1083 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 A1CFQ9NQ94 594 aaKnown RBP16.25■□□□□ 0.19
VPS25-201ENST00000253794 CYP39A1Q9NYL5 469 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 GJD2Q9UKL4 321 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
VPS25-201ENST00000253794 MGAMO43451 1857 aa16.25■□□□□ 0.19
VPS25-201ENST00000253794 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
VPS25-201ENST00000253794 PPFIA3O75145 1194 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 NAPAP54920 295 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 PRMT2P55345 433 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 BECN1Q14457 450 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 KCTD2Q14681 263 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 GALNT17Q6IS24 598 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 DAGLBQ8NCG7 672 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 MMP19Q99542 508 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
VPS25-201ENST00000253794 MEIS2O14770 477 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 XBP1P17861 261 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 ADORA2AP29274 412 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 ANKRD35Q8N283 1001 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 FAM133AQ8N9E0 248 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 DDX11Q96FC9 970 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 PHF20Q9BVI0 1012 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 PSTPIP2Q9H939 334 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms