RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 APPL2Q8NEU8 664 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 TBC1D20Q96BZ9 403 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 UIMC1Q96RL1 719 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 PYM1Q9BRP8 204 aaKnown RBP16.73■□□□□ 0.27
PMPCB-201ENST00000249269 CAPS2Q9BXY5 557 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 EIF3FO00303 357 aaPredicted RBP16.73■□□□□ 0.27
PMPCB-201ENST00000249269 FGFR1OPO95684 399 aaKnown RBP16.73■□□□□ 0.27
PMPCB-201ENST00000249269 ACTN2P35609 894 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 TIMM10P62072 90 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 BIRC3Q13489 604 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 PNOCQ13519 176 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 TAF11Q15544 211 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 E2F4Q16254 413 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 NEK10Q6ZWH5 1172 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 CNGA4Q8IV77 575 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 TBC1D5Q92609 795 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 RNPC3Q96LT9 517 aaKnown RBP16.73■□□□□ 0.27
PMPCB-201ENST00000249269 VIPAS39Q9H9C1 493 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 PCDH12Q9NPG4 1184 aa16.73■□□□□ 0.27
PMPCB-201ENST00000249269 FANCGO15287 622 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 SASH3O75995 380 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 ANKLE2Q86XL3 938 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 TACO1Q9BSH4 297 aaKnown RBP16.72■□□□□ 0.27
PMPCB-201ENST00000249269 CNNM2Q9H8M5 875 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 CLIC5Q9NZA1 410 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 MAN1B1Q9UKM7 699 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 LRP6O75581 1613 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 DEUP1Q05D60 604 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 WASHC4Q2M389 1173 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 TTLL5Q6EMB2 1281 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 LEKR1Q6ZMV7 388 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 RASGRP2Q7LDG7 609 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 NOSTRINQ8IVI9 506 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 ADAM21Q9UKJ8 722 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
PMPCB-201ENST00000249269 FAM25EA8MYX2 175 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 H0Y3Z8 333 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 ZBTB43O43298 467 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 IFNAR1P17181 557 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
PMPCB-201ENST00000249269 NTRK3Q16288 839 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 SPATA1Q5VX52 437 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 OTUD7BQ6GQQ9 843 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 PPFIBP1Q86W92 1011 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 SCLT1Q96NL6 688 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 WDR24Q96S15 920 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
PMPCB-201ENST00000249269 C19orf81C9J6K1 198 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 CHGBP05060 677 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 SSRP1Q08945 709 aaKnown RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 SYCP2LQ5T4T6 812 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 CHST3Q7LGC8 479 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 ARMC9Q7Z3E5 817 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 DCLK2Q8N568 766 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 ZNF483Q8TF39 744 aaPredicted RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 CCDC12Q8WUD4 166 aaPredicted RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 MIEF2Q96C03 454 aa16.71■□□□□ 0.26
PMPCB-201ENST00000249269 RSRC1Q96IZ7 334 aaKnown RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 AVENQ9NQS1 362 aaPredicted RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 XPO7Q9UIA9 1087 aaKnown RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 RRP15Q9Y3B9 282 aaKnown RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.26
PMPCB-201ENST00000249269 COL18A1P39060 1754 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 COL22A1Q8NFW1 1626 aaPredicted RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 SGTAO43765 313 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 AP1G2O75843 785 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 SNUPNO95149 360 aaKnown RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 COL6A1P12109 1028 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 ICA1Q05084 483 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 BEND6Q5SZJ8 279 aaPredicted RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 LLGL2Q6P1M3 1020 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 TMTC1Q8IUR5 882 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 ANKRD18AQ8IVF6 992 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 CHPFQ8IZ52 775 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 FAM71BQ8TC56 605 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 TMC2Q8TDI7 906 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 HDAC7Q8WUI4 952 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 HPS3Q969F9 1004 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 IRX2Q9BZI1 471 aaPredicted RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 ADGRG1Q9Y653 693 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 POLR3GO15318 223 aaPredicted RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 GPAA1O43292 621 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 E2F6O75461 281 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 MTRF1O75570 445 aaKnown RBP16.7■□□□□ 0.26
PMPCB-201ENST00000249269 PYGLP06737 847 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 PBX1P40424 430 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 SPAG1Q07617 926 aa16.7■□□□□ 0.26
PMPCB-201ENST00000249269 CCDC57Q2TAC2 916 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms