RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DDX4Q9NQI0 724 aaKnown RBP21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 AKR1B1P15121 316 aa21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 TECP42680 631 aa21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 SLC27A3Q5K4L6 730 aa21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 SP8Q8IXZ3 490 aa21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 EFCAB8A8MWE9 144 aa21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 TPM1P09493 284 aa21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 EIF6P56537 245 aaKnown RBP21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 UBXN1Q04323 297 aa21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 POTEDQ86YR6 584 aa21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 REXO1Q8N1G1 1221 aaKnown RBP21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 NUP88Q99567 741 aaPredicted RBP21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 MMTAG2Q9BU76 263 aaKnown RBP21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 ADAMTSL1Q8N6G6 1762 aa21.96■■□□□ 1.11
CDC42EP1-201ENST00000249014 ESYT2A0FGR8 921 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 CLCN6P51797 869 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 MXD3Q9BW11 206 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 TRIM9Q9C026 710 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 CUEDC2Q9H467 287 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 TRPC5Q9UL62 973 aaPredicted RBP21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 QSER1Q2KHR3 1735 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 TTI2Q6NXR4 508 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 COA7Q96BR5 231 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 FAM53CQ9NYF3 392 aa21.95■■□□□ 1.1
CDC42EP1-201ENST00000249014 IGKV6D-41A0A0C4DH26 115 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 DPP8Q6V1X1 898 aaPredicted RBP21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 ACRBPQ8NEB7 543 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 COA1Q9GZY4 146 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 MAGEF1Q9HAY2 307 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 PSMA7O14818 248 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 EDIL3O43854 480 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 SNHG28P0DPA3 235 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 TRIM14Q14142 442 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 TMTC1Q8IUR5 882 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 TRIM47Q96LD4 638 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 THAP9Q9H5L6 903 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 ATP6V0A2Q9Y487 856 aa21.94■■□□□ 1.1
CDC42EP1-201ENST00000249014 ABL1P00519 1130 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 KRT9P35527 623 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 PPP2R3AQ06190 1150 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 SEMA3FQ13275 785 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 STIM1Q13586 685 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 MB21D1Q8N884 522 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 ZNF507Q8TCN5 953 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 DUSP9Q99956 384 aaKnown RBP21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 EPC1Q9H2F5 836 aa21.93■■□□□ 1.1
CDC42EP1-201ENST00000249014 LGALS16A8MUM7 142 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 TRIM37O94972 964 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 EEF1GP26641 437 aaKnown RBP21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 STK4Q13043 487 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 ASPRV1Q53RT3 343 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 TMC4Q7Z404 712 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 MTMR9Q96QG7 549 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 C7orf25Q9BPX7 421 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 GPCPD1Q9NPB8 672 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 TTF2Q9UNY4 1162 aaKnown RBP21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 TXKP42681 527 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 PDE4DQ08499 809 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 EEF2KMTQ96G04 330 aa21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 DHTKD1Q96HY7 919 aaPredicted RBP21.92■■□□□ 1.1
CDC42EP1-201ENST00000249014 hCG_1984214I3L0E3 225 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 SLC37A4O43826 429 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 FCER1AP12319 257 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 ASIC1P78348 528 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 CYP26C1Q6V0L0 522 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 PROM2Q8N271 834 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 ZNF713Q8N859 430 aaPredicted RBP21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 SUGT1Q9Y2Z0 365 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 TTC26A0AVF1 554 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 KIF5CO60282 957 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 SCNN1DP51172 638 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 CHP1Q99653 195 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 EXOC1Q9NV70 894 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 SERPINB13Q9UIV8 391 aa21.91■■□□□ 1.1
CDC42EP1-201ENST00000249014 BRWD3Q6RI45 1802 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 TDP2O95551 362 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 ADCY7P51828 1080 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 ORC2Q13416 577 aaPredicted RBP21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 DOK7Q18PE1 504 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 ANKRD40Q6AI12 368 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 RSRC2Q7L4I2 434 aaKnown RBP21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 KRT222Q8N1A0 295 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 CSGALNACT2Q8N6G5 542 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 P2RX5Q93086 422 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 ZC3H12CQ9C0D7 883 aaKnown RBP21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 USP40Q9NVE5 1235 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 MYH4Q9Y623 1939 aa21.9■■□□□ 1.1
CDC42EP1-201ENST00000249014 A0A1W2PQC6 194 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 PPP1R11O60927 126 aaPredicted RBP21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 TTLL1O95922 423 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 SLURP2P0DP57 97 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 SHMT1P34896 483 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 GRB10Q13322 594 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 CALCRLQ16602 461 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 ZNF569Q5MCW4 686 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 HPS3Q969F9 1004 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 JMJD4Q9H9V9 463 aa21.89■■□□□ 1.1
CDC42EP1-201ENST00000249014 PES1O00541 588 aaKnown RBP21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 SRGNP10124 158 aa21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 CCNE1P24864 410 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms