RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 LIFRP42702 1097 aa14.88□□□□□ -0.03
VPREB3-201ENST00000248948 CHST3Q7LGC8 479 aa14.88□□□□□ -0.03
VPREB3-201ENST00000248948 NECAB2Q7Z6G3 386 aa14.88□□□□□ -0.03
VPREB3-201ENST00000248948 TMTC2Q8N394 836 aa14.88□□□□□ -0.03
VPREB3-201ENST00000248948 UBA5Q9GZZ9 404 aa14.88□□□□□ -0.03
VPREB3-201ENST00000248948 CEP290O15078 2479 aa14.88□□□□□ -0.03
VPREB3-201ENST00000248948 BAZ2BQ9UIF8 2168 aaKnown RBP14.87□□□□□ -0.03
VPREB3-201ENST00000248948 ASB14A6NK59 587 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 DNM1LO00429 736 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 NFIBO00712 420 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 DHX16O60231 1041 aaKnown RBP14.87□□□□□ -0.03
VPREB3-201ENST00000248948 AKR1A1P14550 325 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 TAL1P17542 331 aaPredicted RBP14.87□□□□□ -0.03
VPREB3-201ENST00000248948 HSPA4P34932 840 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
VPREB3-201ENST00000248948 QRICH1Q2TAL8 776 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 ARMCX2Q7L311 632 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 ZNF654Q8IZM8 581 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 STAG2Q8N3U4 1231 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 CTCFLQ8NI51 663 aaPredicted RBP14.87□□□□□ -0.03
VPREB3-201ENST00000248948 CLEC4DQ8WXI8 215 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 KCNB2Q92953 911 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 MTMR8Q96EF0 704 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 NEK1Q96PY6 1258 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 C11orf49Q9H6J7 331 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 JMJD4Q9H9V9 463 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 SENP2Q9HC62 589 aa14.87□□□□□ -0.03
VPREB3-201ENST00000248948 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.87□□□□□ -0.03
VPREB3-201ENST00000248948 HMGB1P09429 215 aaKnown RBP14.86□□□□□ -0.03
VPREB3-201ENST00000248948 ZNF865P0CJ78 1059 aaPredicted RBP14.86□□□□□ -0.03
VPREB3-201ENST00000248948 CALM1P0DP23 149 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 CALM2P0DP24 149 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 CALM3P0DP25 149 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 RARBP10826 455 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 COL6A1P12109 1028 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 KIF5BP33176 963 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 CNTN2Q02246 1040 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 TRAF1Q13077 416 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 USH1GQ495M9 461 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 SLC30A10Q6XR72 485 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 RNF207Q6ZRF8 634 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 SGMS1Q86VZ5 419 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 CCDC144CPQ8IYA2 1237 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 RGS22Q8NE09 1264 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 DIS3LQ8TF46 1054 aaKnown RBP14.86□□□□□ -0.03
VPREB3-201ENST00000248948 PAWRQ96IZ0 340 aaKnown RBP14.86□□□□□ -0.03
VPREB3-201ENST00000248948 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
VPREB3-201ENST00000248948 ASTN1O14525 1302 aa14.86□□□□□ -0.03
VPREB3-201ENST00000248948 SOWAHBA6NEL2 793 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 CCDC69A6NI79 296 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 ZBTB5O15062 677 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 SNAI1O95863 264 aaPredicted RBP14.85□□□□□ -0.03
VPREB3-201ENST00000248948 NFXL1Q6ZNB6 911 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 FBXO11Q86XK2 927 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 MORC4Q8TE76 937 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 SPZ1Q9BXG8 430 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 AMNQ9BXJ7 453 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 KATNBL1Q9H079 304 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 RIOX1Q9H6W3 641 aa14.85□□□□□ -0.03
VPREB3-201ENST00000248948 ZHX1Q9UKY1 873 aaPredicted RBP14.85□□□□□ -0.03
VPREB3-201ENST00000248948 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 SMARCA1P28370 1054 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 ALDH5A1P51649 535 aaPredicted RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 GHRHRQ02643 423 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 ACVR2BQ13705 512 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 BAATQ14032 418 aaPredicted RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 COL9A3Q14050 684 aaPredicted RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 PRAMEF19Q5SWL8 479 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 DHX32Q7L7V1 743 aaKnown RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 MCF2L2Q86YR7 1114 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 ARRDC4Q8NCT1 418 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 DNERQ8NFT8 737 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 LZTS2Q9BRK4 669 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 FAM184BQ9ULE4 1060 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
VPREB3-201ENST00000248948 SLC12A7Q9Y666 1083 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 LTBP2Q14767 1821 aa14.84□□□□□ -0.03
VPREB3-201ENST00000248948 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 CYTH3O43739 400 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 GNAQP50148 359 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 RCAN1P53805 252 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 ADCK5Q3MIX3 580 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 SAMD3Q8N6K7 520 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 VTA1Q9NP79 307 aa14.83□□□□□ -0.04
VPREB3-201ENST00000248948 GPHNQ9NQX3 736 aaPredicted RBP14.83□□□□□ -0.04
VPREB3-201ENST00000248948 B4DLN1 442 aa14.82□□□□□ -0.04
VPREB3-201ENST00000248948 ADAMTS4O75173 837 aa14.82□□□□□ -0.04
VPREB3-201ENST00000248948 DUSP11O75319 330 aaKnown RBP14.82□□□□□ -0.04
VPREB3-201ENST00000248948 EDNRBP24530 442 aa14.82□□□□□ -0.04
VPREB3-201ENST00000248948 CALML3P27482 149 aa14.82□□□□□ -0.04
VPREB3-201ENST00000248948 MRPL12P52815 198 aaKnown RBP14.82□□□□□ -0.04
VPREB3-201ENST00000248948 EXOSC10Q01780 885 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms