RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 ABCB11O95342 1321 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 ESYT2A0FGR8 921 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 F13A1P00488 732 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 ALAS1P13196 640 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 KRT2P35908 639 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 INHBEP58166 350 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 NOGQ13253 232 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 PLS1Q14651 629 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
TREM1-201ENST00000244709 FAM177A1Q8N128 213 aaPredicted RBP13.2□□□□□ -0.3
TREM1-201ENST00000244709 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
TREM1-201ENST00000244709 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
TREM1-201ENST00000244709 TXNRD2Q9NNW7 524 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 PCDHA4Q9UN74 947 aa13.2□□□□□ -0.3
TREM1-201ENST00000244709 BTBD18B2RXH4 712 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 OPLAHO14841 1288 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 CALML3P27482 149 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 STAT3P40763 770 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 TM4SF4P48230 202 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 ADCY7P51828 1080 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 TRAF1Q13077 416 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 RESTQ13127 1097 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 NR5A1Q13285 461 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 BLIDQ8IZY5 108 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 DAGLBQ8NCG7 672 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 GTF3C2Q8WUA4 911 aaPredicted RBP13.19□□□□□ -0.3
TREM1-201ENST00000244709 TEX13BQ9BXU2 312 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 C6orf50Q9HD87 102 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 ZCCHC17Q9NP64 241 aaKnown RBP13.19□□□□□ -0.3
TREM1-201ENST00000244709 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 RBPJLQ9UBG7 517 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
TREM1-201ENST00000244709 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 THSD7BQ9C0I4 1608 aa13.19□□□□□ -0.3
TREM1-201ENST00000244709 TCHHQ07283 1943 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 GNA11P29992 359 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 GNL2Q13823 731 aaKnown RBP13.18□□□□□ -0.3
TREM1-201ENST00000244709 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 CUL5Q93034 780 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 ADGRA2Q96PE1 1338 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 M0R2N6 131 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
TREM1-201ENST00000244709 VEGFBP49765 207 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 ERVK-24P63145 666 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
TREM1-201ENST00000244709 UBE2SQ16763 222 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 Q3C1V9 767 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 CLEC4DQ8WXI8 215 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
TREM1-201ENST00000244709 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 PCDHA6Q9UN73 950 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 PCDHA8Q9Y5H6 950 aa13.18□□□□□ -0.3
TREM1-201ENST00000244709 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 LCTP09848 1927 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 NFIBO00712 420 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
TREM1-201ENST00000244709 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
TREM1-201ENST00000244709 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
TREM1-201ENST00000244709 USP17L6PQ6QN14 398 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 ANKRD13CQ8N6S4 541 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 TBC1D5Q92609 795 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
TREM1-201ENST00000244709 TMEM260Q9NX78 707 aa13.17□□□□□ -0.3
TREM1-201ENST00000244709 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
TREM1-201ENST00000244709 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 MEIS2O14770 477 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 CFBP00751 764 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 FOXD4L6Q3SYB3 417 aaPredicted RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 FOXD4L3Q6VB84 417 aaPredicted RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 ZNFX1Q9P2E3 1918 aaKnown RBP13.16□□□□□ -0.3
TREM1-201ENST00000244709 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
TREM1-201ENST00000244709 HSPA6P17066 643 aa13.15□□□□□ -0.3
TREM1-201ENST00000244709 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
TREM1-201ENST00000244709 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
TREM1-201ENST00000244709 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms