RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CCSER1Q9C0I3 900 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 PCDHA6Q9UN73 950 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 PCDHA8Q9Y5H6 950 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 DUSP10Q9Y6W6 482 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 LMAN1P49257 510 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 NLRP5P59047 1200 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 MED4Q9NPJ6 270 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 EDIL3O43854 480 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 PRDX5P30044 214 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 FIGNQ5HY92 759 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 CREG2Q8IUH2 290 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 RMND1Q9NWS8 449 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 PCDHA4Q9UN74 947 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 MINPP1Q9UNW1 487 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 EIF3CLB5ME19 914 aaKnown RBP13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 MYL1P05976 194 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 SIK1P57059 783 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 MECOMQ03112 1051 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 STAG2Q8N3U4 1231 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 SLC44A5Q8NCS7 719 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 DYNLL2Q96FJ2 89 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 EIF3CQ99613 913 aaKnown RBP13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 CCDC87Q9NVE4 849 aa13.4□□□□□ -0.26
SEC61A1-201ENST00000243253 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 GPS2Q13227 327 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 ERLIN1O75477 346 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 PDE4CQ08493 712 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 IQCA1Q86XH1 822 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 BLIDQ8IZY5 108 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 COG1Q8WTW3 980 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 ZNF185O15231 689 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 MMTAG2Q9BU76 263 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 GUCA1BQ9UMX6 200 aa13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 RRP15Q9Y3B9 282 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-201ENST00000243253 PRPHP41219 470 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 NOP2P46087 812 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 CCNI2Q6ZMN8 369 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 SAR1BQ9Y6B6 198 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 GNPATO15228 680 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 ITIH3Q06033 890 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 ANO9A1A5B4 782 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 STXBP3O00186 592 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 KCTD19Q17RG1 926 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 ASTE1Q2TB18 679 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 ANKRD40Q6AI12 368 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 TMED8Q6PL24 325 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 SH3GL2Q99962 352 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 SIK3Q9Y2K2 1263 aa13.38□□□□□ -0.27
SEC61A1-201ENST00000243253 B4DLN1 442 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 EPHB6O15197 1021 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 RNF40O75150 1001 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 PICALMQ13492 652 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 GDAP1L1Q96MZ0 367 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 PLEKHA4Q9H4M7 779 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 SSBP05455 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 DNM2P50570 870 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 STK4Q13043 487 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 GRM4Q14833 912 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 HEATR3Q7Z4Q2 680 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 CCDC170Q8IYT3 715 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 LUC7L2Q9Y383 392 aaKnown RBP13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 PCNTO95613 3336 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 USP17L8P0C7I0 530 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 RIN2Q8WYP3 895 aaPredicted RBP13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 C7orf25Q9BPX7 421 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
SEC61A1-201ENST00000243253 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 PLEKP08567 350 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 RETREG2Q8NC44 543 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 JAKMIP2Q96AA8 810 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 DHTKD1Q96HY7 919 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 RPGRIP1Q96KN7 1286 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms