RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CABP5Q9NP86 173 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 BAZ2BQ9UIF8 2168 aaKnown RBP15.13■□□□□ 0.01
SLIRP-201ENST00000238688 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 NOL7Q9UMY1 257 aaKnown RBP15.13■□□□□ 0.01
SLIRP-201ENST00000238688 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
SLIRP-201ENST00000238688 MYPNQ86TC9 1320 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 KLRF2D3W0D1 207 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 PLEKHA8P1O95397 391 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-201ENST00000238688 AKR1B1P15121 316 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 FCGRTP55899 365 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 BACE1P56817 501 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 GUCY1B3Q02153 619 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 TRAF1Q13077 416 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 MTMR2Q13614 643 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 GMCL1P1Q8NEA9 526 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 RRP36Q96EU6 259 aaKnown RBP15.12■□□□□ 0.01
SLIRP-201ENST00000238688 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-201ENST00000238688 RIOX1Q9H6W3 641 aa15.12■□□□□ 0.01
SLIRP-201ENST00000238688 SEC63Q9UGP8 760 aaKnown RBP15.12■□□□□ 0.01
SLIRP-201ENST00000238688 SPTLC2O15270 562 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 CAVIN2O95810 425 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 PDHBP11177 359 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 HOXD10P28358 340 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 GNA11P29992 359 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 GRK4P32298 578 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 ORC2Q13416 577 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-201ENST00000238688 SF3A1Q15459 793 aaKnown RBP15.11■□□□□ 0.01
SLIRP-201ENST00000238688 FAM110CQ1W6H9 321 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 FOXD4L6Q3SYB3 417 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-201ENST00000238688 PRPF38BQ5VTL8 546 aaKnown RBP15.11■□□□□ 0.01
SLIRP-201ENST00000238688 POTEEQ6S8J3 1075 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 LRSAM1Q6UWE0 723 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 FOXD4L3Q6VB84 417 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-201ENST00000238688 CCDC73Q6ZRK6 1079 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 BICD2Q8TD16 824 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 TMEM106CQ9BVX2 250 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 SH2D4AQ9H788 454 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 BARHL2Q9NY43 387 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 TMEM63CQ9P1W3 806 aa15.11■□□□□ 0.01
SLIRP-201ENST00000238688 TFIP11Q9UBB9 837 aaKnown RBP15.11■□□□□ 0.01
SLIRP-201ENST00000238688 RLFQ13129 1914 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 PEX10O60683 326 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 GADD45BO75293 160 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-201ENST00000238688 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-201ENST00000238688 GUCY1A2P33402 732 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 DEKP35659 375 aaKnown RBP15.1■□□□□ 0.01
SLIRP-201ENST00000238688 ZNF543Q08ER8 600 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 MCTP2Q6DN12 878 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 RAET1EQ8TD07 263 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 SMCR8Q8TEV9 937 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-201ENST00000238688 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 GMCL1Q96IK5 515 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 AIFM3Q96NN9 605 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 EMILIN3Q9NT22 766 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 PNMA3Q9UL41 463 aa15.1■□□□□ 0.01
SLIRP-201ENST00000238688 KIF28PB7ZC32 967 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 C19orf81C9J6K1 198 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 USP17L10C9JJH3 530 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 GH2P01242 217 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 CMA1P23946 247 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 ME1P48163 572 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 FLT3LGP49771 235 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 FAM160A1Q05DH4 1040 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 RBM43Q6ZSC3 357 aaKnown RBP15.09■□□□□ 0.01
SLIRP-201ENST00000238688 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
SLIRP-201ENST00000238688 MRPS27Q92552 414 aaKnown RBP15.09■□□□□ 0.01
SLIRP-201ENST00000238688 P2RX7Q99572 595 aaKnown RBP15.09■□□□□ 0.01
SLIRP-201ENST00000238688 GZF1Q9H116 711 aaPredicted RBP15.09■□□□□ 0.01
SLIRP-201ENST00000238688 ARHGEF10LQ9HCE6 1279 aa15.09■□□□□ 0.01
SLIRP-201ENST00000238688 FAM237AA0A1B0GTK4 181 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 BTBD18B2RXH4 712 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 CUTAO60888 179 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 GCLCP48506 637 aaPredicted RBP15.08■□□□□ 0
SLIRP-201ENST00000238688 NLRP5P59047 1200 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 ICA1Q05084 483 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 IRF5Q13568 498 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 ELOA2Q8IYF1 753 aaPredicted RBP15.08■□□□□ 0
SLIRP-201ENST00000238688 CCDC82Q8N4S0 544 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 TNFRSF25Q93038 417 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 CHAMP1Q96JM3 812 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 ZMYND12Q9H0C1 365 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 NUP62CLQ9H1M0 184 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 TXNRD2Q9NNW7 524 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 CLIP2Q9UDT6 1046 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 GJD2Q9UKL4 321 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 PCDHA4Q9UN74 947 aa15.08■□□□□ 0
SLIRP-201ENST00000238688 LAD1O00515 517 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 MPHOSPH10O00566 681 aaKnown RBP15.07■□□□□ 0
SLIRP-201ENST00000238688 TNPO2O14787 897 aaKnown RBP15.07■□□□□ 0
SLIRP-201ENST00000238688 ADCY3O60266 1144 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 ELNP15502 786 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 FOSBP53539 338 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 03e-8■□□□□ 8.6
SLIRP-201ENST00000238688 PTPAQ15257 358 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms