RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 VSNL1P62760 191 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 C2CD5Q86YS7 1000 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 STAG2Q8N3U4 1231 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 RHOXF2Q9BQY4 288 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 TMEM60Q9H2L4 133 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 IL17RBQ9NRM6 502 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 GYS2P54840 703 aa17.43■□□□□ 0.38
CTSD-201ENST00000236671 GPS2Q13227 327 aa17.43■□□□□ 0.38
CTSD-201ENST00000236671 DTHD1Q6ZMT9 781 aa17.43■□□□□ 0.38
CTSD-201ENST00000236671 NOA1Q8NC60 698 aaKnown RBP17.43■□□□□ 0.38
CTSD-201ENST00000236671 OR8K1Q8NGG5 319 aa17.43■□□□□ 0.38
CTSD-201ENST00000236671 ZNF622Q969S3 477 aaKnown RBP eCLIP17.43■□□□□ 0.38
CTSD-201ENST00000236671 PDE11AQ9HCR9 933 aa17.43■□□□□ 0.38
CTSD-201ENST00000236671 TRIM10Q9UDY6 481 aa17.43■□□□□ 0.38
CTSD-201ENST00000236671 SRGNP10124 158 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
CTSD-201ENST00000236671 MCM6Q14566 821 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 SLC35G1Q2M3R5 365 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 PNMA1Q8ND90 353 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 EXOC4Q96A65 974 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 THAP9Q9H5L6 903 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 SUGCTQ9HAC7 445 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 PSD3Q9NYI0 1048 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 PCDHA6Q9UN73 950 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 PCDHA8Q9Y5H6 950 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 PSMD14O00487 310 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 RHOBTB3O94955 611 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 MYL1P05976 194 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 USP17L8P0C7I0 530 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 HERVK_113P62684 666 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 TFAP4Q01664 338 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 GRM4Q14833 912 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 WDR59Q6PJI9 974 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 TRAPPC11Q7Z392 1133 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 DAGLBQ8NCG7 672 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 GIMAP8Q8ND71 665 aaPredicted RBP17.42■□□□□ 0.38
CTSD-201ENST00000236671 LRRC15Q8TF66 581 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 ANKS1AQ92625 1134 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 KBTBD4Q9NVX7 518 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 ADAM21Q9UKJ8 722 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 CAPN11Q9UMQ6 739 aa17.42■□□□□ 0.38
CTSD-201ENST00000236671 LUC7L2Q9Y383 392 aaKnown RBP17.42■□□□□ 0.38
CTSD-201ENST00000236671 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 TMED8Q6PL24 325 aaPredicted RBP17.41■□□□□ 0.38
CTSD-201ENST00000236671 CCSER1Q9C0I3 900 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 HAUS4Q9H6D7 363 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
CTSD-201ENST00000236671 MAD2L2Q9UI95 211 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 GUCA1BQ9UMX6 200 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 RPS8P62241 208 aaKnown RBP17.41■□□□□ 0.38
CTSD-201ENST00000236671 MUM1L1Q5H9M0 696 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 TRIM47Q96LD4 638 aa17.41■□□□□ 0.38
CTSD-201ENST00000236671 PSMA7O14818 248 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 MEA1Q16626 185 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 INF2Q27J81 1249 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 C12orf60Q5U649 245 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 TTYH3Q9C0H2 523 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
CTSD-201ENST00000236671 CYTH3O43739 400 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 TUBBP07437 444 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 UBA7P41226 1012 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 STIM1Q13586 685 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 WDR93Q6P2C0 686 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 CCDC148Q8NFR7 591 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 JAG2Q9Y219 1238 aa17.39■□□□□ 0.38
CTSD-201ENST00000236671 ROBO3Q96MS0 1386 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 FLT1P17948 1338 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 H0YIN7 160 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 STXBP3O00186 592 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 TULP2O00295 520 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
CTSD-201ENST00000236671 PDE6BP35913 854 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 NT5C2P49902 561 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 CASP8Q14790 479 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 GALNT17Q6IS24 598 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 ZNF662Q6ZS27 426 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.37
CTSD-201ENST00000236671 DYNLL2Q96FJ2 89 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 PLIN2Q99541 437 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 DUSP9Q99956 384 aaKnown RBP17.39■□□□□ 0.37
CTSD-201ENST00000236671 BARHL2Q9NY43 387 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 HDAC6Q9UBN7 1215 aa17.39■□□□□ 0.37
CTSD-201ENST00000236671 IRS2Q9Y4H2 1338 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 KLRG2A4D1S0 409 aaPredicted RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 B4DLN1 442 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 LAD1O00515 517 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 PES1O00541 588 aaKnown RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms