RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ITIH4Q14624 930 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 TMEM266Q2M3C6 531 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 AGBL2Q5U5Z8 902 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 HDAC9Q9UKV0 1011 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 NOS1P29475 1434 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 KRT14P02533 472 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 RNF41Q9H4P4 317 aaPredicted RBP14.08□□□□□ -0.16
VAMP4-201ENST00000236192 PA2G4Q9UQ80 394 aaKnown RBP14.08□□□□□ -0.16
VAMP4-201ENST00000236192 CARMIL3Q8ND23 1372 aa14.08□□□□□ -0.16
VAMP4-201ENST00000236192 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 EEF2P13639 858 aaKnown RBP14.07□□□□□ -0.16
VAMP4-201ENST00000236192 EHHADHQ08426 723 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 KPNB1Q14974 876 aaKnown RBP14.07□□□□□ -0.16
VAMP4-201ENST00000236192 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 GSDMAQ96QA5 445 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 ELF3P78545 371 aaPredicted RBP14.07□□□□□ -0.16
VAMP4-201ENST00000236192 SPATA4Q8NEY3 305 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 PSMD14O00487 310 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 ZPR1O75312 459 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
VAMP4-201ENST00000236192 G2E3Q7L622 706 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 UBL4BQ8N7F7 174 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 PIP4K2CQ8TBX8 421 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 FERMT2Q96AC1 680 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 XPO6Q96QU8 1125 aaKnown RBP14.07□□□□□ -0.16
VAMP4-201ENST00000236192 PALMDQ9NP74 551 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 ZNF148Q9UQR1 794 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 MAP3K2Q9Y2U5 619 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 IRF6O14896 467 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 SUPT3HO75486 399 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 KRT15P19012 456 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 TRAPPC9Q96Q05 1148 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 SIKE1Q9BRV8 207 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 ZMYND12Q9H0C1 365 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
VAMP4-201ENST00000236192 NDC80O14777 642 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 ESRRGP62508 458 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 TMEM60Q9H2L4 133 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 IL1RAPL1Q9NZN1 696 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 IQSEC3Q9UPP2 1182 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 BTBD11A6QL63 1104 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 PHEXP78562 749 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 RASSF7Q02833 373 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 MMGT1Q8N4V1 131 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 CASP10Q92851 521 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 PBKQ96KB5 322 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 UBAP1Q9NZ09 502 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 DBF4Q9UBU7 674 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 ARL2BPQ9Y2Y0 163 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 PCDHA13Q9Y5I0 950 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 ADCY9O60503 1353 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 DYTNA2CJ06 578 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 VHLP40337 213 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 RASGRF2O14827 1237 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 SERPINB6P35237 376 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 COPS2P61201 443 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 WTAPQ15007 396 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 GSTA5Q7RTV2 222 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 DZIP3Q86Y13 1208 aaKnown RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 DIS3L2Q8IYB7 885 aaKnown RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 PAF1Q8N7H5 531 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 UHMK1Q8TAS1 419 aaKnown RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 CATSPER2Q96P56 530 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 SPZ1Q9BXG8 430 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 FAM192AQ9GZU8 254 aa14.06□□□□□ -0.16
VAMP4-201ENST00000236192 FAM207AQ9NSI2 230 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-201ENST00000236192 B4DLN1 442 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 RNF113AO15541 343 aaKnown RBP14.05□□□□□ -0.16
VAMP4-201ENST00000236192 EEF1GP26641 437 aaKnown RBP14.05□□□□□ -0.16
VAMP4-201ENST00000236192 KLHL30Q0D2K2 578 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 NECTIN1Q15223 517 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 INAQ16352 499 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 C16orf87Q6PH81 154 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 ARL8AQ96BM9 186 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 MAML3Q96JK9 1138 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 FMO2Q99518 471 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 NUF2Q9BZD4 464 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 PAG1Q9NWQ8 432 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 AMFRQ9UKV5 643 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 PGRMC1O00264 195 aaKnown RBP14.05□□□□□ -0.16
VAMP4-201ENST00000236192 SART1O43290 800 aaKnown RBP14.05□□□□□ -0.16
VAMP4-201ENST00000236192 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 ATP6V0A1Q93050 837 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 KIFC2Q96AC6 838 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 USP15Q9Y4E8 981 aaPredicted RBP14.05□□□□□ -0.16
VAMP4-201ENST00000236192 GRID2IPA4D2P6 1211 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 TMEM110-MUSTN1A8MSY1 372 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 FESP07332 822 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 IMPDH2P12268 514 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 CCDC105Q8IYK2 499 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 PDE5AO76074 875 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 MLH1P40692 756 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 PITPNM3Q9BZ71 974 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms