RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 SLC15A3Q8IY34 581 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 CEP57L1Q8IYX8 460 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 IGSF22Q8N9C0 903 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 RSPH1Q8WYR4 309 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 NUP58Q9BVL2 599 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 UBE2OQ9C0C9 1292 aaKnown RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 OSBPL3Q9H4L5 887 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ZSWIM4Q9H7M6 989 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 DDX21Q9NR30 783 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFX4-201ENST00000229387 PCMTD2Q9NV79 361 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 SNX14Q9Y5W7 946 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ZNF335Q9H4Z2 1342 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 NWD1Q149M9 1564 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ADGRL3Q9HAR2 1447 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 A0A0D9SFI3 127 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 A0A1B0GVG6 124 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 VPS37CA5D8V6 355 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 ALOX15P16050 662 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 NDUFV2P19404 249 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 SMARCA1P28370 1054 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 OXCT1P55809 520 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 NMIQ13287 307 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 TMEM259Q4ZIN3 620 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 FAAH2Q6GMR7 532 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 GALNT17Q6IS24 598 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 WDR93Q6P2C0 686 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 LARP1Q6PKG0 1096 aaKnown RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 C6orf89Q6UWU4 347 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 LMBR1LQ6UX01 489 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 RSPH3Q86UC2 560 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 HOMER1Q86YM7 354 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 IFNL2Q8IZJ0 200 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 OPTNQ96CV9 577 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 DHTKD1Q96HY7 919 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 MAML3Q96JK9 1138 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 NUP62CLQ9H1M0 184 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ALG2Q9H553 416 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ECHDC1Q9NTX5 307 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 CNPY2Q9Y2B0 182 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 TMA7Q9Y2S6 64 aaKnown RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 AKAP12Q02952 1782 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ANKARQ7Z5J8 1434 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 A0A0G2JLW4 131 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 FANCGO15287 622 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 DDX58O95786 925 aaKnown RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 CTCFP49711 727 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 CBX3Q13185 183 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ACCSLQ4AC99 568 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 SMUG1Q53HV7 270 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 EGFLAMQ63HQ2 1017 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 CHST3Q7LGC8 479 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 SRGAP1Q7Z6B7 1085 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ZNF589Q86UQ0 364 aaPredicted RBP6.32□□□□□ -1.4
RFX4-201ENST00000229387 TTC30AQ86WT1 665 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 LRRC43Q8N309 656 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 LINS1Q8NG48 757 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 P3H4Q92791 437 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 PMM1Q92871 262 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 DBNDD2Q9BQY9 259 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFX4-201ENST00000229387 SLC5A4Q9NY91 659 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 KIF24Q5T7B8 1368 aa6.32□□□□□ -1.4
RFX4-201ENST00000229387 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 ZNF165P49910 485 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 CCT8P50990 548 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 GCKRQ14397 625 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 WHAMMP3Q1A5X7 153 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 GNPTABQ3T906 1256 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 CMPK2Q5EBM0 449 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 EMC10Q5UCC4 262 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 CCDC70Q6NSX1 233 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 FBXO33Q7Z6M2 555 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 RAB11FIP4Q86YS3 637 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 TRIML1Q8N9V2 468 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 WHAMMQ8TF30 809 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 MAIP1Q8WWC4 291 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 GIMAP1Q8WWP7 306 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 TBC1D31Q96DN5 1066 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 SH3GL1Q99961 368 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 ZNHIT6Q9NWK9 470 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 AATFQ9NY61 560 aaKnown RBP eCLIP6.31□□□□□ -1.4
RFX4-201ENST00000229387 TTLL3Q9Y4R7 772 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 SPO11Q9Y5K1 396 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 FER1L4A9Z1Z3 1794 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 MOXD2PA6NHM9 499 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 MAP3K13O43283 966 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 BBOX1O75936 387 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 LACTB2Q53H82 288 aaPredicted RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 JAZF1Q86VZ6 243 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 SMARCC2Q8TAQ2 1214 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 ZNF570Q96NI8 536 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 CENPHQ9H3R5 247 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 DMAP1Q9NPF5 467 aaPredicted RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms