RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 CA12O43570 354 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 DNAJA2O60884 412 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 CTSBP07858 339 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 ACRP10323 421 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 ARL4DP49703 201 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 PDE3AQ14432 1141 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 ELOA3BQ3SY89 546 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 UNC5AQ6ZN44 842 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 NOL8Q76FK4 1167 aaKnown RBP9.05□□□□□ -0.96
CCL1-201ENST00000225842 HDGFL2Q7Z4V5 671 aaPredicted RBP9.05□□□□□ -0.96
CCL1-201ENST00000225842 CNTROBQ8N137 903 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 ELOA3Q8NG57 546 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 ELMO3Q96BJ8 720 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 ATG4CQ96DT6 458 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 METTL14Q9HCE5 456 aaKnown RBP9.05□□□□□ -0.96
CCL1-201ENST00000225842 JPH1Q9HDC5 661 aaPredicted RBP9.05□□□□□ -0.96
CCL1-201ENST00000225842 GMIPQ9P107 970 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 KLHL3Q9UH77 587 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 SRP68Q9UHB9 627 aaKnown RBP9.05□□□□□ -0.96
CCL1-201ENST00000225842 SNCAIPQ9Y6H5 919 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
CCL1-201ENST00000225842 PRAMEF27A3QJZ7 478 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 SLC22A31A6NKX4 558 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 POLRMTO00411 1230 aaKnown RBP9.04□□□□□ -0.96
CCL1-201ENST00000225842 ZNF862O60290 1169 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 LIG1P18858 919 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 MASP1P48740 699 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 GRIK5Q16478 980 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 CYP4F22Q6NT55 531 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 FAM117BQ6P1L5 589 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 EEPD1Q7L9B9 569 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 NLRC3Q7RTR2 1065 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 CACTIN-AS1Q8N1I8 211 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 WDR89Q96FK6 387 aaPredicted RBP9.04□□□□□ -0.96
CCL1-201ENST00000225842 CARD11Q9BXL7 1154 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 NRSN2Q9GZP1 204 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 ATG3Q9NT62 314 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 GGA1Q9UJY5 639 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 CSADQ9Y600 493 aa9.04□□□□□ -0.96
CCL1-201ENST00000225842 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
CCL1-201ENST00000225842 ST20-MTHFSA0A0A6YYL1 179 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 HCLS1P14317 486 aaPredicted RBP9.03□□□□□ -0.96
CCL1-201ENST00000225842 NME1P15531 152 aaKnown RBP9.03□□□□□ -0.96
CCL1-201ENST00000225842 MAP2K2P36507 400 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 GAS6Q14393 721 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 TCEA2Q15560 299 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 HABP4Q5JVS0 413 aaKnown RBP9.03□□□□□ -0.96
CCL1-201ENST00000225842 TAB3Q8N5C8 712 aaPredicted RBP9.03□□□□□ -0.96
CCL1-201ENST00000225842 COG3Q96JB2 828 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 SLC9A7Q96T83 725 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 KRT82Q9NSB4 513 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 SLC12A7Q9Y666 1083 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
CCL1-201ENST00000225842 H0YIN7 160 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 FAM153BP0C7A2 387 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 ALAS2P22557 587 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 TM4SF1P30408 202 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 C12orf40Q86WS4 652 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 C2CD5Q86YS7 1000 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 NANOS1Q8WY41 292 aaKnown RBP9.02□□□□□ -0.97
CCL1-201ENST00000225842 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
CCL1-201ENST00000225842 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
CCL1-201ENST00000225842 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
CCL1-201ENST00000225842 LTN1O94822 1766 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 FAM208AQ9UK61 1670 aaKnown RBP9.01□□□□□ -0.97
CCL1-201ENST00000225842 DLL1O00548 723 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 FSCN2O14926 492 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 AOC2O75106 756 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 SBF1O95248 1867 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 EPHX2P34913 555 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 NCAPHQ15003 741 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 KIAA1211LQ6NV74 962 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 EDC4Q6P2E9 1401 aaKnown RBP9.01□□□□□ -0.97
CCL1-201ENST00000225842 CYFIP1Q7L576 1253 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 PNMA8AQ86V59 439 aaPredicted RBP9.01□□□□□ -0.97
CCL1-201ENST00000225842 SPATA9Q9BWV2 254 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 TAOK3Q9H2K8 898 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 CNNM2Q9H8M5 875 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 DDX21Q9NR30 783 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCL1-201ENST00000225842 HACL1Q9UJ83 578 aa9.01□□□□□ -0.97
CCL1-201ENST00000225842 A0A1W2PP64 1363 aa9□□□□□ -0.97
CCL1-201ENST00000225842 CHURC1-FNTBB4DL54 471 aa9□□□□□ -0.97
CCL1-201ENST00000225842 PGRP06401 933 aa9□□□□□ -0.97
CCL1-201ENST00000225842 GRK4P32298 578 aa9□□□□□ -0.97
CCL1-201ENST00000225842 MAP2K3P46734 347 aa9□□□□□ -0.97
CCL1-201ENST00000225842 NLRP12P59046 1061 aa9□□□□□ -0.97
CCL1-201ENST00000225842 PDE4BQ07343 736 aa9□□□□□ -0.97
CCL1-201ENST00000225842 RRS1Q15050 365 aaKnown RBP9□□□□□ -0.97
CCL1-201ENST00000225842 SLC10A6Q3KNW5 377 aa9□□□□□ -0.97
CCL1-201ENST00000225842 PLEKHG6Q3KR16 790 aa9□□□□□ -0.97
CCL1-201ENST00000225842 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
CCL1-201ENST00000225842 WNT8BQ93098 351 aa9□□□□□ -0.97
CCL1-201ENST00000225842 ZNF622Q969S3 477 aaKnown RBP eCLIP9□□□□□ -0.97
CCL1-201ENST00000225842 ZNF669Q96BR6 464 aaPredicted RBP9□□□□□ -0.97
CCL1-201ENST00000225842 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
CCL1-201ENST00000225842 TMX1Q9H3N1 280 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms