RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 KATNBL1Q9H079 304 aa21.13■□□□□ 0.97
PFN1-201ENST00000225655 CCPG1Q9ULG6 757 aa21.13■□□□□ 0.97
PFN1-201ENST00000225655 SOWAHBA6NEL2 793 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 ASB14A6NK59 587 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 ADCY6O43306 1168 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 NT5C2P49902 561 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 KCNA10Q16322 511 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 TTBK2Q6IQ55 1244 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 NUP133Q8WUM0 1156 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 UPF3AQ9H1J1 476 aaKnown RBP21.12■□□□□ 0.97
PFN1-201ENST00000225655 CYP39A1Q9NYL5 469 aa21.12■□□□□ 0.97
PFN1-201ENST00000225655 TRIM43BA6NCK2 446 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 REC8O95072 547 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 PDHBP11177 359 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 SLC16A2P36021 539 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 MUM1L1Q5H9M0 696 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 SYDE2Q5VT97 1194 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 SH3RF1Q7Z6J0 888 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 PCSK9Q8NBP7 692 aaKnown RBP21.11■□□□□ 0.97
PFN1-201ENST00000225655 ESR2Q92731 530 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 TRIM43Q96BQ3 446 aaPredicted RBP21.11■□□□□ 0.97
PFN1-201ENST00000225655 ANO2Q9NQ90 1003 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 LRRC37A2A6NM11 1700 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 LCTP09848 1927 aa21.11■□□□□ 0.97
PFN1-201ENST00000225655 NEDD4P46934 1319 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 FRMPD2Q68DX3 1309 aaPredicted RBP21.1■□□□□ 0.97
PFN1-201ENST00000225655 MYADML2A6NDP7 307 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 ZNF213O14771 459 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 CLTBP09497 229 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 GJA9P57773 515 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 ANKRD33Q7Z3H0 272 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 BADQ92934 168 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 TOX2Q96NM4 488 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 SPC25Q9HBM1 224 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 GPCPD1Q9NPB8 672 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 STARD7Q9NQZ5 370 aa21.1■□□□□ 0.97
PFN1-201ENST00000225655 U3KPZ7 1027 aaPredicted RBP21.1■□□□□ 0.97
PFN1-201ENST00000225655 ASTN1O14525 1302 aa21.09■□□□□ 0.97
PFN1-201ENST00000225655 C6orf222P0C671 652 aaPredicted RBP21.09■□□□□ 0.97
PFN1-201ENST00000225655 SNHG28P0DPA3 235 aa21.09■□□□□ 0.97
PFN1-201ENST00000225655 NKX3-2P78367 333 aa21.09■□□□□ 0.97
PFN1-201ENST00000225655 ZNF543Q08ER8 600 aa21.09■□□□□ 0.97
PFN1-201ENST00000225655 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
PFN1-201ENST00000225655 DEFB123Q8N688 67 aa21.09■□□□□ 0.97
PFN1-201ENST00000225655 PNMA2Q9UL42 364 aa21.09■□□□□ 0.97
PFN1-201ENST00000225655 ELP1O95163 1332 aa21.08■□□□□ 0.97
PFN1-201ENST00000225655 PQBP1O60828 265 aaKnown RBP21.08■□□□□ 0.97
PFN1-201ENST00000225655 TNFAIP2Q03169 654 aa21.08■□□□□ 0.97
PFN1-201ENST00000225655 NSMFQ6X4W1 530 aa21.08■□□□□ 0.97
PFN1-201ENST00000225655 DGKHQ86XP1 1220 aa21.08■□□□□ 0.97
PFN1-201ENST00000225655 GLT1D1Q96MS3 346 aa21.08■□□□□ 0.97
PFN1-201ENST00000225655 KIAA0355O15063 1070 aa21.07■□□□□ 0.96
PFN1-201ENST00000225655 ASGR1P07306 291 aa21.07■□□□□ 0.96
PFN1-201ENST00000225655 IRX5P78411 483 aaPredicted RBP21.07■□□□□ 0.96
PFN1-201ENST00000225655 GNASQ5JWF2 1037 aa21.07■□□□□ 0.96
PFN1-201ENST00000225655 IL25Q9H293 177 aa21.07■□□□□ 0.96
PFN1-201ENST00000225655 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.06■□□□□ 0.96
PFN1-201ENST00000225655 DCDC2CA8MYV0 355 aa21.06■□□□□ 0.96
PFN1-201ENST00000225655 CTAGE5O15320 804 aa21.06■□□□□ 0.96
PFN1-201ENST00000225655 CCDC178Q5BJE1 867 aa21.06■□□□□ 0.96
PFN1-201ENST00000225655 IQCA1Q86XH1 822 aa21.06■□□□□ 0.96
PFN1-201ENST00000225655 MORC4Q8TE76 937 aa21.06■□□□□ 0.96
PFN1-201ENST00000225655 ZKSCAN3Q9BRR0 538 aa21.06■□□□□ 0.96
PFN1-201ENST00000225655 GNEQ9Y223 722 aaKnown RBP21.06■□□□□ 0.96
PFN1-201ENST00000225655 MROH7Q68CQ1 1323 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 LOC102724159A0A0B4J2E5 919 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 NFIBO00712 420 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 KDM4AO75164 1064 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 ITGB8P26012 769 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 FAAP100Q0VG06 881 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 BAATQ14032 418 aaPredicted RBP21.05■□□□□ 0.96
PFN1-201ENST00000225655 PWP2Q15269 919 aaKnown RBP21.05■□□□□ 0.96
PFN1-201ENST00000225655 SHHQ15465 462 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 GPATCH4Q5T3I0 446 aaKnown RBP21.05■□□□□ 0.96
PFN1-201ENST00000225655 RNF20Q5VTR2 975 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 Q7L0L9 218 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 VTA1Q9NP79 307 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 TMEM39AQ9NV64 488 aa21.05■□□□□ 0.96
PFN1-201ENST00000225655 ADD3Q9UEY8 706 aaKnown RBP21.05■□□□□ 0.96
PFN1-201ENST00000225655 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 RAG1P15918 1043 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 CDK7P50613 346 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 C9orf50Q5SZB4 431 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 IQSEC1Q6DN90 963 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 FAM109BQ6ICB4 259 aaPredicted RBP21.04■□□□□ 0.96
PFN1-201ENST00000225655 TAPT1Q6NXT6 567 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 NOL8Q76FK4 1167 aaKnown RBP21.04■□□□□ 0.96
PFN1-201ENST00000225655 TLK2Q86UE8 772 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 CLEC4DQ8WXI8 215 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 ANKS1AQ92625 1134 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 MAP4K1Q92918 833 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 PURBQ96QR8 312 aaKnown RBP21.04■□□□□ 0.96
PFN1-201ENST00000225655 LSG1Q9H089 658 aaKnown RBP21.04■□□□□ 0.96
PFN1-201ENST00000225655 MTMR10Q9NXD2 777 aa21.04■□□□□ 0.96
PFN1-201ENST00000225655 DDX49Q9Y6V7 483 aaKnown RBP21.04■□□□□ 0.96
PFN1-201ENST00000225655 A0A0U1RQG5 324 aaPredicted RBP21.03■□□□□ 0.96
PFN1-201ENST00000225655 B4E1Z4 1266 aa21.03■□□□□ 0.96
PFN1-201ENST00000225655 EPB41L2O43491 1005 aaKnown RBP21.03■□□□□ 0.96
PFN1-201ENST00000225655 SMPD1P17405 629 aa21.03■□□□□ 0.96
PFN1-201ENST00000225655 PTH1RQ03431 593 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms