RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 DDAH1O94760 285 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-201ENST00000222275 ZNF865P0CJ78 1059 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-201ENST00000222275 KIF5BP33176 963 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 RCAN1P53805 252 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 PPP2R5BQ15173 497 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 ASPRV1Q53RT3 343 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 GJC2Q5T442 439 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-201ENST00000222275 C7orf61Q8IZ16 206 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-201ENST00000222275 PDRG1Q9NUG6 133 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 ISY1Q9ULR0 285 aaKnown RBP15.88■□□□□ 0.13
UPK1A-201ENST00000222275 MTMR7Q9Y216 660 aa15.88■□□□□ 0.13
UPK1A-201ENST00000222275 ZBED4O75132 1171 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 PARP1P09874 1014 aaKnown RBP15.87■□□□□ 0.13
UPK1A-201ENST00000222275 SNHG28P0DPA3 235 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 PDHBP11177 359 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 SYN1P17600 705 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 GNAQP50148 359 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 STAT2P52630 851 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
UPK1A-201ENST00000222275 CCDC96Q2M329 555 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 Q6ZUG5 572 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
UPK1A-201ENST00000222275 LENG1Q96BZ8 264 aaPredicted RBP15.87■□□□□ 0.13
UPK1A-201ENST00000222275 TBC1D32Q96NH3 1257 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 AGXT2Q9BYV1 514 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 NR2E3Q9Y5X4 410 aa15.87■□□□□ 0.13
UPK1A-201ENST00000222275 SEPT4O43236 478 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 SLC16A2P36021 539 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 CNTN2Q02246 1040 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 ZNF543Q08ER8 600 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 IKQ13123 557 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-201ENST00000222275 KCTD2Q14681 263 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 RABEP1Q15276 862 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 ZNF654Q8IZM8 581 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 PURBQ96QR8 312 aaKnown RBP15.86■□□□□ 0.13
UPK1A-201ENST00000222275 UPF3BQ9BZI7 483 aaKnown RBP15.86■□□□□ 0.13
UPK1A-201ENST00000222275 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-201ENST00000222275 PNMA2Q9UL42 364 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 PRR12Q9ULL5 1215 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 DIS3Q9Y2L1 958 aaKnown RBP15.86■□□□□ 0.13
UPK1A-201ENST00000222275 A0A0C4DFX4 3053 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 ZNF236Q9UL36 1845 aa15.86■□□□□ 0.13
UPK1A-201ENST00000222275 CCDC196A0A1B0GTZ2 297 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 ADCY6O43306 1168 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 NEK4P51957 841 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 ATN1P54259 1190 aaPredicted RBP15.85■□□□□ 0.13
UPK1A-201ENST00000222275 TROAPQ12815 778 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 MUM1L1Q5H9M0 696 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.85■□□□□ 0.13
UPK1A-201ENST00000222275 BRF1Q92994 677 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 TCEANC2Q96MN5 208 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 LRRC2Q9BYS8 371 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 HOMER2Q9NSB8 354 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 CTDP1Q9Y5B0 961 aaPredicted RBP15.85■□□□□ 0.13
UPK1A-201ENST00000222275 ASTN1O14525 1302 aa15.85■□□□□ 0.13
UPK1A-201ENST00000222275 COL6A3P12111 3177 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 ZBTB43O43298 467 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 CPA1P15085 419 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 SMARCA1P28370 1054 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 EVCP57679 992 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 GRM4Q14833 912 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 LRRC41Q15345 812 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 CCDC174Q6PII3 467 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 BTNL9Q6UXG8 535 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 GDF15Q99988 308 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 CPVLQ9H3G5 476 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 GPCPD1Q9NPB8 672 aa15.84■□□□□ 0.13
UPK1A-201ENST00000222275 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
UPK1A-201ENST00000222275 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
UPK1A-201ENST00000222275 KLF18A0A0U1RQI7 1052 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 ST18O60284 1047 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 PGK1P00558 417 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 PTGS1P23219 599 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 APOA5Q6Q788 366 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 MAMDC4Q6UXC1 1216 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 FANCBQ8NB91 859 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 DDX11Q96FC9 970 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 ZNF274Q96GC6 653 aaPredicted RBP15.83■□□□□ 0.12
UPK1A-201ENST00000222275 KATNBL1Q9H079 304 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 SLC5A4Q9NY91 659 aa15.83■□□□□ 0.12
UPK1A-201ENST00000222275 PALM3A6NDB9 673 aaPredicted RBP15.82■□□□□ 0.12
UPK1A-201ENST00000222275 DNM1LO00429 736 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 SOX1O00570 391 aaPredicted RBP15.82■□□□□ 0.12
UPK1A-201ENST00000222275 MSCO60682 206 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 COPB2P35606 906 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 ADCYAP1R1P41586 468 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 OAZ1P54368 228 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 TRAF1Q13077 416 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 TMEM63BQ5T3F8 832 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 FAM133AQ8N9E0 248 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 CHST13Q8NET6 341 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 FERMT2Q96AC1 680 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 SENP2Q9HC62 589 aa15.82■□□□□ 0.12
UPK1A-201ENST00000222275 A1CFQ9NQ94 594 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms