RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 A0A1W2PQ64 194 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 A0A1W2PQD8 194 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 CDC27P30260 824 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 OSBPL5Q9H0X9 879 aaPredicted RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 ROBO1Q9Y6N7 1651 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 TNS2Q63HR2 1409 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 SOWAHDA6NJG2 315 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 IFNAR1P17181 557 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 MAGEA8P43361 318 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 CCNHP51946 323 aaPredicted RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 MRPS25P82663 173 aaKnown RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 EXOSC10Q01780 885 aaKnown RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 UBXN1Q04323 297 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 SPAG1Q07617 926 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 USP4Q13107 963 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 RNF187Q5TA31 235 aaPredicted RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 TATDN2Q93075 761 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 PLA2G12BQ9BX93 195 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 CTAGE9A4FU28 777 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 ATP2C2O75185 946 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 CDC25AP30304 524 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 PTGDRQ13258 359 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 NEDD9Q14511 834 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 KRT79Q5XKE5 535 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 MLKLQ8NB16 471 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 TTF2Q9UNY4 1162 aaKnown RBP11.72□□□□□ -0.53
VPS18-201ENST00000220509 ZEB2O60315 1214 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 CYP2D6P10635 497 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 RXRBP28702 533 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 LIFRP42702 1097 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 BTDP43251 543 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 CLNS1AP54105 237 aaKnown RBP11.72□□□□□ -0.53
VPS18-201ENST00000220509 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 LUC7LQ9NQ29 371 aaKnown RBP11.72□□□□□ -0.53
VPS18-201ENST00000220509 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 FMNL1O95466 1100 aaPredicted RBP11.72□□□□□ -0.53
VPS18-201ENST00000220509 SCG2P13521 617 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 SF3A3Q12874 501 aaKnown RBP eCLIP11.72□□□□□ -0.53
VPS18-201ENST00000220509 ZFYVE27Q5T4F4 411 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 EXOC4Q96A65 974 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 KIF9Q9HAQ2 790 aa11.72□□□□□ -0.53
VPS18-201ENST00000220509 PHLPP2Q6ZVD8 1323 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 GSG1L2A8MUP6 293 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 ENC1O14682 589 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 KIAA0754O94854 1291 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 CCT5P48643 541 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 NAA25Q14CX7 972 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 OGFOD1Q8N543 542 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
VPS18-201ENST00000220509 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 CSRNP2Q9H175 543 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 MMRN2Q9H8L6 949 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 STRCQ7RTU9 1775 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 KLRF2D3W0D1 207 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 AKR1B10O60218 316 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 NAT2P11245 290 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
VPS18-201ENST00000220509 CD151P48509 253 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 CDR1P51861 262 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 TBC1D8BQ0IIM8 1120 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.53
VPS18-201ENST00000220509 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.53
VPS18-201ENST00000220509 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 RABGGTAQ92696 567 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.71□□□□□ -0.53
VPS18-201ENST00000220509 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
VPS18-201ENST00000220509 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.53
VPS18-201ENST00000220509 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 FRMPD2Q68DX3 1309 aaPredicted RBP11.71□□□□□ -0.54
VPS18-201ENST00000220509 SYNRGQ9UMZ2 1314 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 ANKRD33BA6NCL7 494 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 MMP10P09238 476 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.54
VPS18-201ENST00000220509 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.54
VPS18-201ENST00000220509 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 FGFR1OPO95684 399 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 MMP1P03956 469 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 TXNRD3Q86VQ6 643 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 FAM84BQ96KN1 310 aaPredicted RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 PSMB7Q99436 277 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 TAB2Q9NYJ8 693 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 SAMM50Q9Y512 469 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms