RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 COA7Q96BR5 231 aa30.82■■■□□ 2.52
STUB1-201ENST00000219548 COPB2P35606 906 aa30.81■■■□□ 2.52
STUB1-201ENST00000219548 GPKOWQ92917 476 aaPredicted RBP eCLIP30.81■■■□□ 2.52
STUB1-201ENST00000219548 RNF26Q9BY78 433 aaPredicted RBP30.81■■■□□ 2.52
STUB1-201ENST00000219548 PCDHA1Q9Y5I3 950 aa30.81■■■□□ 2.52
STUB1-201ENST00000219548 PRPF3O43395 683 aaKnown RBP30.8■■■□□ 2.52
STUB1-201ENST00000219548 TKFCQ3LXA3 575 aa30.8■■■□□ 2.52
STUB1-201ENST00000219548 PLEKHH3Q7Z736 793 aa30.8■■■□□ 2.52
STUB1-201ENST00000219548 PNMA2Q9UL42 364 aa30.8■■■□□ 2.52
STUB1-201ENST00000219548 CDKL5O76039 1030 aa30.79■■■□□ 2.52
STUB1-201ENST00000219548 AKAP17AQ02040 695 aaKnown RBP30.79■■■□□ 2.52
STUB1-201ENST00000219548 SSRP1Q08945 709 aaKnown RBP30.79■■■□□ 2.52
STUB1-201ENST00000219548 HEATR3Q7Z4Q2 680 aa30.79■■■□□ 2.52
STUB1-201ENST00000219548 CHST13Q8NET6 341 aa30.79■■■□□ 2.52
STUB1-201ENST00000219548 ACAD9Q9H845 621 aa30.79■■■□□ 2.52
STUB1-201ENST00000219548 PLXNA1Q9UIW2 1896 aa30.79■■■□□ 2.52
STUB1-201ENST00000219548 ABCB11O95342 1321 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 HTTP42858 3142 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 NFIBO00712 420 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 PKN1Q16512 942 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 TRIM22Q8IYM9 498 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 NSUN7Q8NE18 718 aaKnown RBP30.78■■■□□ 2.52
STUB1-201ENST00000219548 CLEC4DQ8WXI8 215 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 IVNS1ABPQ9Y6Y0 642 aa30.78■■■□□ 2.52
STUB1-201ENST00000219548 ZNF236Q9UL36 1845 aa30.77■■■□□ 2.52
STUB1-201ENST00000219548 LCTP09848 1927 aa30.77■■■□□ 2.52
STUB1-201ENST00000219548 JAK2O60674 1132 aa30.77■■■□□ 2.52
STUB1-201ENST00000219548 WWC2Q6AWC2 1192 aa30.77■■■□□ 2.52
STUB1-201ENST00000219548 FBXO40Q9UH90 709 aa30.77■■■□□ 2.52
STUB1-201ENST00000219548 PTPDC1A2A3K4 754 aa30.76■■■□□ 2.52
STUB1-201ENST00000219548 PTPREP23469 700 aa30.76■■■□□ 2.52
STUB1-201ENST00000219548 PFKFB3Q16875 520 aaPredicted RBP30.76■■■□□ 2.52
STUB1-201ENST00000219548 MMP19Q99542 508 aa30.76■■■□□ 2.52
STUB1-201ENST00000219548 RBM27Q9P2N5 1060 aaKnown RBP30.76■■■□□ 2.52
STUB1-201ENST00000219548 SCG2P13521 617 aa30.76■■■□□ 2.51
STUB1-201ENST00000219548 SNX21Q969T3 373 aa30.76■■■□□ 2.51
STUB1-201ENST00000219548 MRPL11Q9Y3B7 192 aaKnown RBP30.76■■■□□ 2.51
STUB1-201ENST00000219548 CENPFP49454 3210 aa30.75■■■□□ 2.51
STUB1-201ENST00000219548 FCER1AP12319 257 aa30.75■■■□□ 2.51
STUB1-201ENST00000219548 NSMFQ6X4W1 530 aa30.75■■■□□ 2.51
STUB1-201ENST00000219548 DDX11Q96FC9 970 aa30.75■■■□□ 2.51
STUB1-201ENST00000219548 A1CFQ9NQ94 594 aaKnown RBP30.75■■■□□ 2.51
STUB1-201ENST00000219548 TRIM17Q9Y577 477 aa30.75■■■□□ 2.51
STUB1-201ENST00000219548 STK36Q9NRP7 1315 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 OPLAHO14841 1288 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 TRAF1Q13077 416 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 GRB14Q14449 540 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 KCTD2Q14681 263 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 TYW1BQ6NUM6 668 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 ANKRD35Q8N283 1001 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 AIFM3Q96NN9 605 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 GABRQQ9UN88 632 aa30.74■■■□□ 2.51
STUB1-201ENST00000219548 DEXIO95424 95 aa30.73■■■□□ 2.51
STUB1-201ENST00000219548 ADORA2AP29274 412 aa30.73■■■□□ 2.51
STUB1-201ENST00000219548 PRKCZQ05513 592 aa30.73■■■□□ 2.51
STUB1-201ENST00000219548 OTOP1Q7RTM1 612 aa30.73■■■□□ 2.51
STUB1-201ENST00000219548 TBC1D5Q92609 795 aa30.73■■■□□ 2.51
STUB1-201ENST00000219548 ORC3Q9UBD5 711 aaPredicted RBP30.73■■■□□ 2.51
STUB1-201ENST00000219548 SLC15A5A6NIM6 579 aa30.72■■■□□ 2.51
STUB1-201ENST00000219548 K7ELQ4 463 aaPredicted RBP30.72■■■□□ 2.51
STUB1-201ENST00000219548 STXBP3O00186 592 aa30.72■■■□□ 2.51
STUB1-201ENST00000219548 STRNO43815 780 aa30.72■■■□□ 2.51
STUB1-201ENST00000219548 FDPSP14324 419 aaKnown RBP30.72■■■□□ 2.51
STUB1-201ENST00000219548 MORN1Q5T089 497 aa30.72■■■□□ 2.51
STUB1-201ENST00000219548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.72■■■□□ 2.51
STUB1-201ENST00000219548 BARHL2Q9NY43 387 aa30.72■■■□□ 2.51
STUB1-201ENST00000219548 GJD2Q9UKL4 321 aa30.72■■■□□ 2.51
STUB1-201ENST00000219548 PGK2P07205 417 aa30.71■■■□□ 2.51
STUB1-201ENST00000219548 NAPAP54920 295 aa30.71■■■□□ 2.51
STUB1-201ENST00000219548 ARHGEF6Q15052 776 aa30.71■■■□□ 2.51
STUB1-201ENST00000219548 HSCBQ8IWL3 235 aa30.71■■■□□ 2.51
STUB1-201ENST00000219548 NUDT12Q9BQG2 462 aa30.71■■■□□ 2.51
STUB1-201ENST00000219548 LLPHQ9BRT6 129 aaKnown RBP30.71■■■□□ 2.51
STUB1-201ENST00000219548 SRRDQ9UH36 339 aa30.71■■■□□ 2.51
STUB1-201ENST00000219548 GNRH1P01148 92 aa30.7■■■□□ 2.51
STUB1-201ENST00000219548 SLC30A10Q6XR72 485 aa30.7■■■□□ 2.51
STUB1-201ENST00000219548 ABRAQ8N0Z2 381 aa30.7■■■□□ 2.51
STUB1-201ENST00000219548 SMARCC2Q8TAQ2 1214 aa30.7■■■□□ 2.51
STUB1-201ENST00000219548 SOCS4Q8WXH5 440 aa30.7■■■□□ 2.51
STUB1-201ENST00000219548 CYP39A1Q9NYL5 469 aa30.7■■■□□ 2.51
STUB1-201ENST00000219548 hCG_1984214I3L0E3 225 aa30.7■■■□□ 2.5
STUB1-201ENST00000219548 HOXD10P28358 340 aa30.7■■■□□ 2.5
STUB1-201ENST00000219548 FLT3LGP49771 235 aa30.7■■■□□ 2.5
STUB1-201ENST00000219548 BAATQ14032 418 aaPredicted RBP30.7■■■□□ 2.5
STUB1-201ENST00000219548 RNF207Q6ZRF8 634 aa30.7■■■□□ 2.5
STUB1-201ENST00000219548 ZNF713Q8N859 430 aaPredicted RBP30.7■■■□□ 2.5
STUB1-201ENST00000219548 SHISA4Q96DD7 197 aa30.7■■■□□ 2.5
STUB1-201ENST00000219548 VPS54Q9P1Q0 977 aa30.7■■■□□ 2.5
STUB1-201ENST00000219548 MCM3APO60318 1980 aa30.69■■■□□ 2.5
STUB1-201ENST00000219548 COBLO75128 1261 aa30.69■■■□□ 2.5
STUB1-201ENST00000219548 CFBP00751 764 aa30.69■■■□□ 2.5
STUB1-201ENST00000219548 MAP2K5Q13163 448 aa30.69■■■□□ 2.5
STUB1-201ENST00000219548 USP6NLQ92738 828 aa30.69■■■□□ 2.5
STUB1-201ENST00000219548 PRDM10Q9NQV6 1147 aa30.69■■■□□ 2.5
STUB1-201ENST00000219548 PFASO15067 1338 aa30.68■■■□□ 2.5
STUB1-201ENST00000219548 CYP2B6P20813 491 aa30.68■■■□□ 2.5
STUB1-201ENST00000219548 CALML3P27482 149 aa30.68■■■□□ 2.5
STUB1-201ENST00000219548 RPS6P62753 249 aaKnown RBP30.68■■■□□ 2.5
STUB1-201ENST00000219548 PPP1R18Q6NYC8 613 aa30.68■■■□□ 2.5
STUB1-201ENST00000219548 MCF2L2Q86YR7 1114 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms