RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TRERF1Q96PN7 1200 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 RAB20Q9NX57 234 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 IFT172Q9UG01 1749 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ZNF532Q9HCE3 1301 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 LRRD1A4D1F6 860 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CCDC188H7C350 402 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 HADHQ16836 314 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 LONRF2Q1L5Z9 754 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ZMYM1Q5SVZ6 1142 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 GPATCH4Q5T3I0 446 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 SND1Q7KZF4 910 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-201ENST00000219084 NEK8Q86SG6 692 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ARHGEF25Q86VW2 580 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 MORC4Q8TE76 937 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 NSMCE1Q8WV22 266 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 FAM227BQ96M60 508 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 NOC2LQ9Y3T9 749 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 CHD2O14647 1828 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 PNMA6EA0A0J9YXQ4 647 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ANO9A1A5B4 782 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 LIFRP42702 1097 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 GNGT1P63211 74 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 DCUN1D2Q6PH85 259 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 RRAGAQ7L523 313 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 TCEANC2Q96MN5 208 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CAPN7Q9Y6W3 813 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 SYNGAP1Q96PV0 1343 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 TBC1D8O95759 1140 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ATF7P17544 494 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 KRT15P19012 456 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 COPB1P53618 953 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 DMP1Q13316 513 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 ANKRD20A4Q4UJ75 823 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ANKRD20A8PQ5CZ79 823 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ANKRD20A2Q5SQ80 823 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 C6orf118Q5T5N4 469 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ANKRD20A1Q5TYW2 823 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CENPKQ9BS16 269 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CARD10Q9BWT7 1032 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 LSM14BQ9BX40 385 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 PPCSQ9HAB8 311 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ANGPTL2Q9UKU9 493 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ZNF215Q9UL58 517 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 RRP15Q9Y3B9 282 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 PODXLO00592 558 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 DCTN3O75935 186 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 HSPD1P10809 573 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 KRT3P12035 628 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 MAGEA9P43362 315 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 HERC4Q5GLZ8 1057 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 TYW1BQ6NUM6 668 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CDKL2Q92772 493 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 GGA1Q9UJY5 639 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 V9GY48 417 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 STAM2O75886 525 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PCCAP05165 728 aaPredicted RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 ATF2P15336 505 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 ZKSCAN8Q15776 578 aaPredicted RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 MAN2A1Q16706 1144 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 HSP90AA4PQ58FG1 418 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 ANKRD35Q8N283 1001 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 CNBD1Q8NA66 436 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 FANCBQ8NB91 859 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SLF1Q9BQI6 1058 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 OSBPL5Q9H0X9 879 aaPredicted RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 VIPAS39Q9H9C1 493 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 C1orf112Q9NSG2 853 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 MID2Q9UJV3 735 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 BEND3Q5T5X7 828 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 CCDC13Q8IYE1 715 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 ELOA2Q8IYF1 753 aaPredicted RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 TCHPQ9BT92 498 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 HSPA1LP34931 641 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 NDUFA8P51970 172 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 MKRN3Q13064 507 aaKnown RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 PPP2R5AQ15172 486 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PPP1R18Q6NYC8 613 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 LRRC59Q96AG4 307 aaKnown RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 TTC25Q96NG3 672 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 EIF2AQ9BY44 585 aaKnown RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 TRIM4Q9C037 500 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PANK4Q9NVE7 773 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 IGSF1Q8N6C5 1336 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 GGPS1O95749 300 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SERPING1P05155 500 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 ZBED6P86452 979 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 RESP18Q5W5W9 173 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 AP1ARQ63HQ0 302 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 RPAINQ86UA6 219 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 MYCT1Q8N699 235 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 CHURC1Q8WUH1 139 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 EFHD1Q9BUP0 239 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 VEZTQ9HBM0 779 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 TAB2Q9NYJ8 693 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 EXOC3O60645 756 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms