RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 SYCP3Q8IZU3 236 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 TBC1D22AQ8WUA7 517 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 TSPYL1Q9H0U9 437 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 SLIT3O75094 1523 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 USP17L5A8MUK1 530 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 SRGAP2O75044 1071 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 MRPS25P82663 173 aaKnown RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 GRAPQ13588 217 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 BRD3Q15059 726 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 TERF2Q15554 542 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 ZYXQ15942 572 aaKnown RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 C12orf60Q5U649 245 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 GALNT17Q6IS24 598 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 GRAPLQ8TC17 118 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 CEP95Q96GE4 821 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 FAM107BQ9H098 131 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 TMEM60Q9H2L4 133 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 TMEM260Q9NX78 707 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 BUB1O43683 1085 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 TADA3O75528 432 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 SERPINB2P05120 415 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 WHAMMP3Q1A5X7 153 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 FBXO33Q7Z6M2 555 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 CCDC84Q86UT8 332 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-201ENST00000217109 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 PKD2L1Q9P0L9 805 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 A0A087X0B3 334 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 POTEMA6NI47 508 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 EEF1GP26641 437 aaKnown RBP10.85□□□□□ -0.67
CSTF1-201ENST00000217109 TUBB2AQ13885 445 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 MAATS1Q7Z4T9 603 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 MB21D1Q8N884 522 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 TUBB2BQ9BVA1 445 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-201ENST00000217109 SPATA31A1Q5TZJ5 1347 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 BCL9O00512 1426 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 DCCP43146 1447 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 CXCR5P32302 372 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 PPP1R2P41236 205 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 TUBB4BP68371 445 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 LARP4BQ92615 738 aaKnown RBP10.85□□□□□ -0.67
CSTF1-201ENST00000217109 CD209Q9NNX6 404 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 PARP3Q9Y6F1 533 aa10.85□□□□□ -0.67
CSTF1-201ENST00000217109 FCER1AP12319 257 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 CCNE1P24864 410 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 SMCR8Q8TEV9 937 aaPredicted RBP10.84□□□□□ -0.67
CSTF1-201ENST00000217109 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
CSTF1-201ENST00000217109 CYP4A11Q02928 519 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 MYOCDQ8IZQ8 938 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
CSTF1-201ENST00000217109 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 CETN3O15182 167 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 KCNJ6P48051 423 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 CACNB3P54284 484 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 PRR16Q569H4 304 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 CC2D1AQ6P1N0 951 aaPredicted RBP10.84□□□□□ -0.67
CSTF1-201ENST00000217109 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 TRIM10Q9UDY6 481 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 TFR2Q9UP52 801 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 PCDHA1Q9Y5I3 950 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 FAM196BA6NMK8 535 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 GYPCP04921 128 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 GPBP1Q86WP2 473 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 POLD4Q9HCU8 107 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 MRFAP1Q9Y605 127 aa10.84□□□□□ -0.67
CSTF1-201ENST00000217109 TUBBP07437 444 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 UTP14CQ5TAP6 766 aaKnown RBP10.83□□□□□ -0.68
CSTF1-201ENST00000217109 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 SND1Q7KZF4 910 aaKnown RBP eCLIP10.83□□□□□ -0.689e-6■■■■□ 21.9
CSTF1-201ENST00000217109 MAEAQ7L5Y9 396 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 TSGA10Q9BZW7 698 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 L2HGDHQ9H9P8 463 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 NHEJ1Q9H9Q4 299 aaPredicted RBP10.83□□□□□ -0.68
CSTF1-201ENST00000217109 VEZTQ9HBM0 779 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 ABCB6Q9NP58 842 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 ZBTB21Q9ULJ3 1066 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 PCDHA6Q9UN73 950 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 PCDHA8Q9Y5H6 950 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 CCDC151A5D8V7 595 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 POLR2FP61218 127 aaKnown RBP10.83□□□□□ -0.68
CSTF1-201ENST00000217109 FAM26FQ5R3K3 315 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 CERS3Q8IU89 383 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 AK8Q96MA6 479 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 GOPCQ9HD26 462 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 LGALS16A8MUM7 142 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 LAD1O00515 517 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 HSF2BPO75031 334 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 KLHL30Q0D2K2 578 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 GRM4Q14833 912 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 C10orf67Q8IYJ2 551 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 TEKT1Q969V4 418 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms