RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CYTH2Q99418 400 aa11.41□□□□□ -0.58
VCL-201ENST00000211998 LZTS2Q9BRK4 669 aa11.41□□□□□ -0.58
VCL-201ENST00000211998 PICK1Q9NRD5 415 aa11.41□□□□□ -0.58
VCL-201ENST00000211998 TMEM51Q9NW97 253 aa11.41□□□□□ -0.58
VCL-201ENST00000211998 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
VCL-201ENST00000211998 A0A1W2PQ27 194 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 A0A1W2PQ64 194 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 A0A1W2PQD8 194 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 IL13P35225 146 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 SLCO1A2P46721 670 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 FAM89AQ96GI7 184 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 CLIC6Q96NY7 704 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 TUBB6Q9BUF5 446 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.58
VCL-201ENST00000211998 EXOC7Q9UPT5 735 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 SNX16P57768 344 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 PTH1RQ03431 593 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 CUL3Q13618 768 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 TMTC3Q6ZXV5 915 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 G2E3Q7L622 706 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 ABCC2Q92887 1545 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 ATP2A3Q93084 1043 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 PCDHA5Q9Y5H7 936 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 GRK7Q8WTQ7 553 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 LPIN2Q92539 896 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 MYL10Q9BUA6 226 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 NFU1Q9UMS0 254 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 PLAAQ9Y263 795 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 GMNCA6NCL1 334 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 NXNQ6DKJ4 435 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 C16orf87Q6PH81 154 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 MAP7D3Q8IWC1 876 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
VCL-201ENST00000211998 TEKT1Q969V4 418 aa11.4□□□□□ -0.58
VCL-201ENST00000211998 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 EEF1DP29692 281 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 NELFCDQ8IXH7 590 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 FNBP1Q96RU3 617 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 STOML1Q9UBI4 398 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 POC1B-GALNT4F8VUJ3 575 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 PLTPP55058 493 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 BRDTQ58F21 947 aaPredicted RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 BEND6Q5SZJ8 279 aaPredicted RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 SARM1Q6SZW1 724 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 CCDC89Q8N998 374 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 DRC3Q9H069 523 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 TBC1D7Q9P0N9 293 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 MEFVO15553 781 aaPredicted RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 CCDC144BQ3MJ40 725 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 NUGGCQ68CJ6 796 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 KRT80Q6KB66 452 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 RIC8AQ9NPQ8 531 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 G3BP2Q9UN86 482 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 PASKQ96RG2 1323 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 CHL1O00533 1208 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 MRPS25P82663 173 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 SNX1Q13596 522 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 ANKRD35Q8N283 1001 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 ATP10AO60312 1499 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 PPP1R12AO14974 1030 aaPredicted RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 COBLO75128 1261 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 MMEP08473 750 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 ZFXP17010 805 aaPredicted RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 TXKP42681 527 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 TOGARAM2Q6ZUX3 1019 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 KRT25Q7Z3Z0 450 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 PLA2G4DQ86XP0 818 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 CCDC117Q8IWD4 279 aaPredicted RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 GSPT2Q8IYD1 628 aaKnown RBP11.39□□□□□ -0.59
VCL-201ENST00000211998 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 OSBPL9Q96SU4 736 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 ARMT1Q9H993 441 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 IFT122Q9HBG6 1241 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 DAAM1Q9Y4D1 1078 aa11.39□□□□□ -0.59
VCL-201ENST00000211998 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
VCL-201ENST00000211998 MAPK13O15264 365 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 PFKFB2O60825 505 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 ATF2P15336 505 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 MAN1A1P33908 653 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 SLC8A3P57103 927 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 GRAMD1BQ3KR37 738 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
VCL-201ENST00000211998 CCDC68Q9H2F9 335 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 HAUS2Q9NVX0 235 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 SATB2Q9UPW6 733 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 MOCS3O95396 460 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 RAD23BP54727 409 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 STRN3Q13033 797 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 KIF24Q5T7B8 1368 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms