RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 MCM7P33993 719 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 SLC16A2P36021 539 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 RAD51AP2Q09MP3 1159 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 SEPT2Q15019 361 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 HSD3B7Q9H2F3 369 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 CXCL9Q07325 125 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 COL2A1P02458 1487 aaPredicted RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 PCNTO95613 3336 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 GNG11P61952 73 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 LZTS2Q9BRK4 669 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 TGFB2P61812 414 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 INF2Q27J81 1249 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 COA7Q96BR5 231 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 A0A1W2PRG0 241 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 H2AFXP16104 143 aaPredicted RBP12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 SMARCA1P28370 1054 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 PTGER2P43116 358 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 ETF1P62495 437 aaKnown RBP12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 TMEM260Q9NX78 707 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 ZNF70Q9UC06 446 aaPredicted RBP12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 CASP1P29466 404 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 CDC25AP30304 524 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 MKL1Q969V6 931 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 CSRNP1Q96S65 589 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 PCDHA5Q9Y5H7 936 aa12.75□□□□□ -0.37
GPATCH1-201ENST00000170564 VWA3AA6NCI4 1184 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 ENTPD3O75355 529 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 CALML3P27482 149 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 UBASH3AP57075 661 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 NCAPHQ15003 741 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 NBPF9Q3BBW0 867 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 LRRC15Q8TF66 581 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 MTMR8Q96EF0 704 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 MTRQ99707 1265 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 RSPH14Q9UHP6 348 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 USP17L10C9JJH3 530 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 FANCCQ00597 558 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 GRIPAP1Q4V328 841 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 ASPRV1Q53RT3 343 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 TMEM39BQ9GZU3 492 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 SMCO2A6NFE2 343 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 NAPAP54920 295 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 TXLNBQ8N3L3 684 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 CEP131Q9UPN4 1083 aa12.74□□□□□ -0.37
GPATCH1-201ENST00000170564 TRIM66O15016 1216 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 CASQ1P31415 396 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 MCM6Q14566 821 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 E2F4Q16254 413 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 MED15Q96RN5 788 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 MYH7BA7E2Y1 1941 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 PP2D1A8MPX8 630 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 GH2P01242 217 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 TAL1P17542 331 aaPredicted RBP12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 SPATA20Q8TB22 786 aa12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
GPATCH1-201ENST00000170564 WNT10BO00744 389 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 NLRP12P59046 1061 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 NT5DC1Q5TFE4 455 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 NYAP2Q9P242 653 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 IMPACTQ9P2X3 320 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 ASTN2O75129 1339 aaPredicted RBP12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
GPATCH1-201ENST00000170564 NLGN2Q8NFZ4 835 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms