RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 BCORQ6W2J9 1755 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 CICQ96RK0 1608 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 COL1A1P02452 1464 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 MAP3K15Q6ZN16 1313 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 CNTNAP5Q8WYK1 1306 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 TNS3Q68CZ2 1445 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 MNAT1P51948 309 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 MAP3K12Q12852 859 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 SLC35G1Q2M3R5 365 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 MIIPQ5JXC2 388 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 HAUS3Q68CZ6 603 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 KIF6Q6ZMV9 814 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 KIRREL3Q8IZU9 778 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 SPATA4Q8NEY3 305 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 IFT81Q8WYA0 676 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 MTMR8Q96EF0 704 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 RNPC3Q96LT9 517 aaKnown RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 CAPN11Q9UMQ6 739 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 NFU1Q9UMS0 254 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 TOGARAM1Q9Y4F4 1720 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 ZNF233A6NK53 670 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 EIF3HO15372 352 aaKnown RBP eCLIP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 NLRP5P59047 1200 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 INF2Q27J81 1249 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC178Q5BJE1 867 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 TTI2Q6NXR4 508 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 EFCAB13Q8IY85 973 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 C4orf32Q8N8J7 132 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 FAM212AQ96EL1 285 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 JPH2Q9BR39 696 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 RNF26Q9BY78 433 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 HAUS4Q9H6D7 363 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 QTRT2Q9H974 415 aaKnown RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 MYH3P11055 1940 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 GOLGA8HP0CJ92 632 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 TBC1D8BQ0IIM8 1120 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 ZNF772Q68DY9 489 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 GIGYF2Q6Y7W6 1299 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC24Q8N4L8 307 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CSGALNACT2Q8N6G5 542 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC51Q96ER9 411 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CNOT6LQ96LI5 555 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 GBP3Q9H0R5 595 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CNNM2Q9H8M5 875 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 PDS5AQ29RF7 1337 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 USP17L12C9JPN9 530 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 USP17L21D6R901 530 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 GTPBP6O43824 516 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 FTCDO95954 541 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 HPDP32754 393 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 SLC1A4P43007 532 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 ALX1Q15699 326 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CT47A1Q5JQC4 288 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 MMS22LQ6ZRQ5 1243 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 C3orf67Q6ZVT6 689 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 LPIN2Q92539 896 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 OSBPL9Q96SU4 736 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CENPHQ9H3R5 247 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 VIPAS39Q9H9C1 493 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 SLC39A2Q9NP94 309 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 SNX12Q9UMY4 172 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 DOCK2Q92608 1830 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 TIAM2Q8IVF5 1701 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 A0A087WUV0 522 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 EBAG9O00559 213 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 NDUFAB1O14561 156 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 ATP2C2O75185 946 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 EIF4A3P38919 411 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 RASSF7Q02833 373 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 ARID5AQ03989 594 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 ACTN3Q08043 901 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 LRRC41Q15345 812 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 TMTC3Q6ZXV5 915 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 DDX42Q86XP3 938 aaKnown RBP eCLIP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 PIK3R5Q8WYR1 880 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 SECISBP2LQ93073 1101 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 FERMT2Q96AC1 680 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC43Q96MW1 224 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 IFIH1Q9BYX4 1025 aaKnown RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 TRPC5Q9UL62 973 aaPredicted RBP6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 FAM184BQ9ULE4 1060 aa6.5□□□□□ -1.37
CEACAM1-201ENST00000161559 LRRC53A6NM62 1247 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 SEMA3EO15041 775 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 KRT86O43790 486 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PDE6BP35913 854 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 DDB1Q16531 1140 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 MEA1Q16626 185 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 SH3GL2Q99962 352 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NLRC4Q9NPP4 1024 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 EXOC1Q9NV70 894 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 MYO1AQ9UBC5 1043 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms