RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 EDIL3O43854 480 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 TNNI2P48788 182 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 NAP1L4Q99733 375 aaKnown RBP16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 HSD3B7Q9H2F3 369 aa16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
RTFDC1-201ENST00000023939 FZD9O00144 591 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 MYL1P05976 194 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 ERCC5P28715 1186 aaPredicted RBP16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 ISM2Q6H9L7 571 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 CUEDC2Q9H467 287 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 DISC1Q9NRI5 854 aa16.2■□□□□ 0.18
RTFDC1-201ENST00000023939 PLA2G6O60733 806 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 CAP2P40123 477 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 UBA7P41226 1012 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 TRAF1Q13077 416 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 TNFAIP1Q13829 316 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 NBPF9Q3BBW0 867 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 IGSF22Q8N9C0 903 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 ENOX1Q8TC92 643 aaKnown RBP16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 GOPCQ9HD26 462 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 GINM1Q9NU53 330 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 AFMP43652 599 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 AP3B2Q13367 1082 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 SPC24Q8NBT2 197 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 MTRQ99707 1265 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 SH2D4AQ9H788 454 aa16.19■□□□□ 0.18
RTFDC1-201ENST00000023939 TMEM232C9JQI7 657 aa16.18■□□□□ 0.18
RTFDC1-201ENST00000023939 STAT6P42226 847 aa16.18■□□□□ 0.18
RTFDC1-201ENST00000023939 NAALADL2Q58DX5 795 aa16.18■□□□□ 0.18
RTFDC1-201ENST00000023939 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
RTFDC1-201ENST00000023939 TTC12Q9H892 705 aaPredicted RBP16.18■□□□□ 0.18
RTFDC1-201ENST00000023939 PPP1R1BQ9UD71 204 aaPredicted RBP16.18■□□□□ 0.18
RTFDC1-201ENST00000023939 RAD21O60216 631 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 USP11P51784 963 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 PDIA5Q14554 519 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 CALCRLQ16602 461 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 UBE2SQ16763 222 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 MOXD1Q6UVY6 613 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 FBXO11Q86XK2 927 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 DRC7Q8IY82 874 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 ACER1Q8TDN7 264 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 TEPSINQ96N21 525 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 VCPKMTQ9H867 229 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 KBTBD4Q9NVX7 518 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 RMND1Q9NWS8 449 aa16.17■□□□□ 0.18
RTFDC1-201ENST00000023939 ASNSP08243 561 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 ECE1P42892 770 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 RASA3Q14644 834 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CCDC186Q7Z3E2 898 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CABP7Q86V35 215 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 MBOAT7Q96N66 472 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 KCNF1Q9H3M0 494 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 IMPACTQ9P2X3 320 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 PRR12Q9ULL5 1215 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CYP3A7-CYP3A51PA0A087WV96 503 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 PP2D1A8MPX8 630 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 PHF20L1A8MW92 1017 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 SLC37A4O43826 429 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 TDP2O95551 362 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 FOSP01100 380 aaPredicted RBP16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 ZNF18P17022 549 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 PTGS1P23219 599 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CYP3A7P24462 503 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CDC25AP30304 524 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 PRELPP51888 382 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 STAT2P52630 851 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 FANCCQ00597 558 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CUL4BQ13620 913 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 RAB34Q9BZG1 259 aa16.16■□□□□ 0.18
RTFDC1-201ENST00000023939 MEIS2O14770 477 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 FMR1Q06787 632 aaKnown RBP eCLIP16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 DHX8Q14562 1220 aaKnown RBP16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 TMEM266Q2M3C6 531 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 KIAA1755Q5JYT7 1200 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 FAM160B2Q86V87 743 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 CHURC1Q8WUH1 139 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms