RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Gga3Q8BMI3 718 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 HlfQ8BW74 295 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Fam53cQ8BXQ8 393 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Prc1Q99K43 603 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 AdarQ99MU3 1178 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Kif17Q99PW8 1038 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Glrx3Q9CQM9 337 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Casz1Q9CWL2 1761 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Map3k15A2AQW0 1331 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Wnt7aP24383 349 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Fam178bQ24JP3 464 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Aak1Q3UHJ0 959 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Nlrp2Q4PLS0 1046 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Igf2bp2Q5SF07 592 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ttc26Q8BS45 554 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Def6Q8C2K1 630 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Sh3bp5lQ99LH9 392 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 TbcbQ9D1E6 244 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Mad2l2Q9D752 211 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 RabggtaQ9JHK4 567 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ercc4Q9QZD4 917 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Nlrp5Q9R1M5 1163 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Myh1Q5SX40 1942 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 AsnsQ61024 561 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Rexo1Q7TT28 1213 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Znf526Q8BI66 675 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Cdk8Q8R3L8 464 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Txndc5Q91W90 417 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Pla2g12bQ99P27 195 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Eef1gQ9D8N0 437 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Dpf1Q9QX66 387 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ulk4Q3V129 1303 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Myh2G3UW82 1942 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Rsrc2A2RTL5 376 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Sema3fO88632 785 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Gjc1P28229 396 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ranbp1P34022 203 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Esyt2Q3TZZ7 845 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Slc9a2Q3ZAS0 814 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Nsrp1Q5NCR9 542 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Pde1cQ64338 706 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Haus6Q6NV99 933 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Naa15Q80UM3 865 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Lrsam1Q80ZI6 727 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Pspc1Q8R326 523 aaKnown RBP8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Dbndd2Q9CRD4 158 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Serpinb12Q9D7P9 423 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Dydc1Q9D9T0 175 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ccdc89Q9DA73 370 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 NapaQ9DB05 295 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Tpcn1Q9EQJ0 817 aa8.33□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Vmn2r71L7N2D8 855 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ca8P28651 291 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Pola2P33611 600 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 NeblQ0II04 452 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Tcerg1lQ3B807 590 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Krt87Q6IMF0 495 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Recql4Q75NR7 1216 aaKnown RBP8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 RadxQ8C779 850 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Spice1Q8C804 860 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Kctd10Q922M3 315 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 EcsitQ9QZH6 435 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Zranb2Q9R020 330 aaKnown RBP8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Lrrc32G3XA59 663 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 RargP18911 458 aaKnown RBP8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Vsnl1P62761 191 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Hook2Q7TMK6 716 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ankrd13aQ80UP5 588 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Cgref1Q8R1U2 281 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Klhl20Q8VCK5 604 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Slfn1Q9Z0I7 337 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Col18a1P39061 1774 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Rsbn1lD3Z0K6 821 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Apol10bG3X9K7 334 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Nck2O55033 380 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Tspyl3Q3UYP3 334 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ddx3yQ62095 658 aaKnown RBP8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Cfap100Q80VN0 613 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Cep95Q8BVV7 827 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Traf3ip3Q8C0G2 513 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Rcor2Q8C796 523 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Trim9Q8C7M3 817 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Kiaa1024Q8K3V7 917 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Emilin2Q8K482 1074 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Gdap1l1Q8VE33 370 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Lgr5Q9Z1P4 907 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 AW822073A0A0N4SUK1 652 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Rgs22G3UYX5 1258 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Ppfibp2O35711 882 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Foxn3Q499D0 457 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Herc4Q6PAV2 1057 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Kctd3Q8BFX3 815 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Washc1Q8VDD8 475 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Srgap2Q91Z67 1071 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Q9D5Q8 446 aa8.32□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Pcdh11xF6ZNL5 1338 aa8.31□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Zfp142G5E869 1843 aa8.31□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Gm7356A0A087WSA6 508 aa8.31□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Rexo5D3YW29 759 aa8.31□□□□□ -1.08
Bdnf-207ENSMUST00000111047 Atp8b1Q148W0 1251 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms