RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Gpt2Q8BGT5 522 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Myl6bQ8CI43 207 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Tbc1d23Q8K0F1 684 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 DonsonQ9QXP4 560 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Cbx8Q9QXV1 362 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Rfc1P35601 1131 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Gcnt1Q09324 428 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 MyrflQ3UN70 904 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ddx3yQ62095 658 aaKnown RBP12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Tshz2Q68FE9 1030 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 D130040H23RikQ8BII3 405 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Exoc1Q8R3S6 894 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Rhobtb3Q9CTN4 611 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Efhd1Q9D4J1 240 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Scn9aQ62205 1984 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ifnar1P33896 590 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Tnni3kQ5GIG6 834 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Kcnj11Q61743 390 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Irak1Q62406 710 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Cyp4f39Q8BGU0 532 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Slc9b1Q8C0X2 565 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 HibadhQ99L13 335 aaKnown RBP12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Slfn1Q9Z0I7 337 aa12.97□□□□□ -0.33
Trim11-202ENSMUST00000108809 Prl2c3P04768 224 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Trap1aP19473 224 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ttll12Q3UDE2 639 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Fhod1Q6P9Q4 1197 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Dclk3Q8BWQ5 790 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Cdk17Q8K0D0 523 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Kiaa0319lQ8K135 1048 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Eif3cQ8R1B4 911 aaKnown RBP12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Krtap5-3Q9D226 196 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Arpp21Q9DCB4 807 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Tfap4Q9JIZ5 338 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Foxn2E9Q7L6 429 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Snx12O70493 165 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 RaraP11416 462 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Tubb5P99024 444 aaKnown RBP12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Tmtc1Q3UV71 942 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Golga5Q9QYE6 729 aa12.96□□□□□ -0.33
Trim11-202ENSMUST00000108809 Bpifb4A2BGH0 617 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Alppl2P24823 529 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 NfixP70257 488 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Ccdc34Q3UI66 367 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Prpf38aQ4FK66 312 aaKnown RBP12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Madcam1Q61826 405 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Arid3aQ62431 601 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Fkbp3Q62446 224 aaKnown RBP12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 Pkd2l2Q9JLG4 621 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 GsdmeQ9Z2D3 512 aa12.96□□□□□ -0.34
Trim11-202ENSMUST00000108809 VirmaA2AIV2 1811 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Armc3A2AU72 881 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Top1Q04750 767 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Rhpn1Q61085 643 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Atxn2lQ7TQH0 1049 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Ccdc73Q8CDM4 1066 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Cmtr1Q9DBC3 837 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Rai14Q9EP71 979 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Hnrnph3D3Z3N4 346 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Ube3aO08759 870 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Znf280dQ68FE8 974 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Cdk8Q8R3L8 464 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Srgap2Q91Z67 1071 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Sh2b1Q91ZM2 756 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 March8Q9DBD2 286 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 UncxO08934 530 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Cct6aP80317 531 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 GlyctkQ8QZY2 523 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Sar1bQ9CQC9 198 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Dydc2Q9D3X8 139 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Mrpl12Q9DB15 201 aaKnown RBP12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 EhhadhQ9DBM2 718 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 FignQ9ERZ6 759 aa12.95□□□□□ -0.34
Trim11-202ENSMUST00000108809 Pip4k2aO70172 405 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Lilrb3P97484 841 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Hook2Q7TMK6 716 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 TbcbQ9D1E6 244 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Sh3tc1G3X9F6 1346 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Gm7356A0A087WSA6 508 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Akr1c19G3X9Y6 323 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 DnttP09838 530 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Eya3P97480 510 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Ell2Q3UKU1 639 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Lrrfip1Q3UZ39 729 aaKnown RBP12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Mettl25Q6NXH8 597 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Asic1Q6NXK8 526 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Ccdc93Q7TQK5 629 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Lca5Q80ST9 704 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Grin3bQ91ZU9 1003 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 EpgnQ924X1 152 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 ThegQ9JMB1 375 aa12.94□□□□□ -0.34
Trim11-202ENSMUST00000108809 Zfp781Q0P5U5 243 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Acot10Q32MW3 439 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Slc44a4Q91VA1 707 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Dnajc19Q9CQV7 116 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Jag1Q9QXX0 1218 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Gm5114W4VSN8 858 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Ltbp1Q8CG19 1712 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Gm45208A0A140LJ36 292 aa12.93□□□□□ -0.34
Trim11-202ENSMUST00000108809 Magea10A2AMW4 325 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms