RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Egfl6Q9JJZ5 550 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Scgb2b18A0A087WPA9 112 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Cyp2j7A0A140T8U1 504 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 A0A1Y7VML8 143 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Usp5P56399 858 aaKnown RBP20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 RragbQ6NTA4 374 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Fam161bQ8CB59 589 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Fermt2Q8CIB5 680 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Nod2Q8K3Z0 1020 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Card14Q99KF0 999 aa20.5■□□□□ 0.87
Trim47-202ENSMUST00000106441 Prss51A0A286YDY8 319 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Flvcr1B2RXV4 560 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Fam186bD3Z420 943 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Sema3fO88632 785 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Pak1O88643 545 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Wnt7aP24383 349 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Nap1l2P51860 460 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Oog3Q3UWY1 500 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Cep112Q5PR68 954 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Tcp11l2Q8K1H7 517 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Rrp1bQ91YK2 724 aaKnown RBP20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Col24a1Q30D77 1733 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Tubb5P99024 444 aaKnown RBP20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Tsr1Q5SWD9 803 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Smarca1Q6PGB8 1046 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Rasgrp4Q8BTM9 673 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Dynll2Q9D0M5 89 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Myo1hQ9D6A1 958 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Copb1Q9JIF7 953 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Hip1rQ9JKY5 1068 aa20.49■□□□□ 0.87
Trim47-202ENSMUST00000106441 Ano3A2AHL1 981 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 1700003F12RikA2AKE5 210 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Serpina16D3Z660 418 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Znf667Q2TL60 609 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Mrps31Q61733 384 aaKnown RBP20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 PaoxQ8C0L6 504 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 LpxnQ99N69 386 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 NapgQ9CWZ7 312 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Scrn1Q9CZC8 414 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 PdclQ9DBX2 301 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Tspoap1Q7TNF8 1846 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Scgb2b19J3QM75 112 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 LeprP48356 1162 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 VrtnQ3SYK4 740 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Jakmip3Q5DTN8 844 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Fxr1Q61584 677 aaKnown RBP20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Map3k11Q80XI6 850 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Ndufb9Q9CQJ8 179 aa20.48■□□□□ 0.87
Trim47-202ENSMUST00000106441 Dock5B2RY04 1868 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Gm3409A0A0G2JE67 319 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Tbc1d2B1AVH7 922 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Vcam1P29533 739 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Rasa2P58069 847 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Cep131Q62036 1060 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Adam6bQ6IMH7 756 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Prpf40bQ80W14 870 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Gga3Q8BMI3 718 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Triml1Q8BVP1 470 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Atxn7Q8R4I1 867 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Sgpp1Q9JI99 430 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Ltbp2O08999 1813 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Pappa2E9PZ87 1789 aa20.47■□□□□ 0.87
Trim47-202ENSMUST00000106441 Fhod1Q6P9Q4 1197 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Snd1Q78PY7 910 aaKnown RBP20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Tmc4Q7TQ65 694 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Cct8l1Q80YT3 562 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 NelfbQ8C4Y3 580 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Q8C5C9 218 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Spata16Q8C636 571 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Cnbd1B1AWM0 430 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Zfand4D3Z3C6 739 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Vmn2r68L7N2B3 851 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Klra1P20937 262 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 ItpripQ3TNL8 555 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Cct6bQ61390 531 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 RadxQ8C779 850 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Txndc5Q91W90 417 aa20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 Znf638Q61464 1960 aaKnown RBP20.46■□□□□ 0.87
Trim47-202ENSMUST00000106441 A0A0U1RNP2 1173 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Pfkfb3A7UAK5 555 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Cnga2Q62398 664 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gbp7Q91Z40 638 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ubxn2aQ99KJ0 258 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Rexo5D3YW29 759 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Cdh15P33146 784 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ano9P86044 747 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Aak1Q3UHJ0 959 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 MycbpapQ5SUV2 932 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Q66JV7 365 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Aggf1Q7TN31 711 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Adcy2Q80TL1 1090 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 KhnynQ80U38 671 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Tmx1Q8VBT0 278 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Smc1bQ920F6 1248 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Myo1cQ9WTI7 1063 aa20.45■□□□□ 0.86
Trim47-202ENSMUST00000106441 Irf6P97431 467 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Tbc1d9bQ5SVR0 1263 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Lrrn2Q6PHP6 730 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Tmem39bQ810L4 492 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Mical1Q8VDP3 1048 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms