RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Tmem132dQ76HP3 1097 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Atg4cQ811C2 458 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ccdc142Q8CAI1 738 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Plcd1Q8R3B1 756 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cyp2c50Q91X77 490 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ccdc96Q9CR92 584 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cyp26c1B2RXA7 518 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 MarcksP26645 309 aaKnown RBP7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ece1Q4PZA2 769 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fxr1Q61584 677 aaKnown RBP7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ppp2r5bQ6PD28 497 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ece2Q80Z60 881 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Socs7Q8VHQ2 579 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Slc5a5Q99PN0 618 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Krtap5-3Q9D226 196 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Wdr64Q9D565 1086 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ltn1Q6A009 1767 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ppef2O35385 757 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Kcna1P16388 495 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Slc27a1Q60714 646 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Me3Q8BMF3 604 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Amer2Q8CCJ4 672 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ppp1r16bQ8VHQ3 568 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Bicd2Q921C5 820 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Styxl1Q9DAR2 321 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 DcpsQ9DAR7 338 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 CpdO89001 1377 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Sptbn5F6UCX4 1208 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Guca2bO09051 106 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Pcif1P59114 706 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Znhit6Q3UFB2 460 aaKnown RBP7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Zfp957Q3UT76 567 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Shisa4Q8CA71 197 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Serpina10Q8R121 448 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Il21rQ9JHX3 529 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fem1bQ9Z2G0 627 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Btnl4A2CG29 586 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Rad51bO35719 350 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ctdnep1Q3TP92 244 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Miga1Q4QQM5 600 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ano1Q8BHY3 960 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ubxn8Q9QZ49 277 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cry2Q9R194 592 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 FanccP50652 591 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Sparcl1P70663 650 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fam83hQ148V8 1209 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ccdc33Q3ULW6 985 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fam114a1Q9D281 569 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nudt5Q9JKX6 218 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Znhit2Q9QY66 399 aa7.79□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gm10093D3YYI8 482 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Zc3h7bF8VPP8 982 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Has3O08650 554 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Hdac1O09106 482 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 MybP06876 636 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Slc16a10Q3U9N9 512 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Kctd3Q8BFX3 815 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Lzts2Q91YU6 671 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Q9D5Q8 446 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nup188Q6ZQH8 1759 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Skint3A7TZF0 458 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Api5O35841 504 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Exosc10P56960 887 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Sec23aQ01405 765 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Prmt6Q6NZB1 378 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tmem59lQ7TNI2 337 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Smc2Q8CG48 1191 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 PdgfcQ8CI19 345 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 DnerQ8JZM4 737 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Matr3Q8K310 846 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fbxo33Q8VE08 562 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Xpo5Q924C1 1204 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 NaspQ99MD9 773 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Bloc1s2Q9CWG9 143 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nup98Q6PFD9 1816 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Bdp1Q571C7 2467 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ripor3A1L3T7 938 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Xxylt1Q3U4G3 392 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Prpf4bQ61136 1007 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ahcyl2Q68FL4 613 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tex2Q6ZPJ0 1128 aaKnown RBP7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fam205cQ80YD3 371 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gps2Q921N8 327 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cyp2e1Q05421 493 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gas2l3Q3UWW6 683 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Sycp1Q62209 993 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 OplahQ8K010 1288 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Dnajc17Q91WT4 303 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Htra3Q9D236 459 aa7.78□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gm7356A0A087WSA6 508 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 C87977A2A958 498 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 AoahO35298 574 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lamp1P11438 406 aaKnown RBP7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Rnf19aP50636 840 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lrrc15Q80X72 579 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Usp20Q8C6M1 916 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Fermt2Q8CIB5 680 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Myh2G3UW82 1942 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Vwa3bJ9JI28 736 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Il13ra2O88786 383 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms