RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Samd15F6XZJ7 620 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pik3r1P26450 724 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Map2k1P31938 393 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Nf2P46662 596 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Exosc10P56960 887 aaKnown RBP13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Pcdhb15Q91Y04 786 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Serpinb12Q9D7P9 423 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 DexiQ9WUQ7 95 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ift172Q6VH22 1749 aa13.1□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Dnaaf5B9EJR8 853 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Mxd3Q80US8 206 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 1700020D05RikQ99PB1 294 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Stx17Q9D0I4 301 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Rtkn2Q14B46 604 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Trpc6Q61143 930 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 BC048507Q80ZS7 89 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 CutaQ9CQ89 177 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Elf2Q9JHC9 593 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Fem1bQ9Z2G0 627 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm4841E9QAA8 417 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 P4hbP09103 509 aaKnown RBP13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Mphosph8Q3TYA6 858 aaKnown RBP13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gm10392Q3V3I3 114 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Il17raQ60943 864 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Krt39Q6IFX4 482 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Prkag2Q91WG5 566 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 HomezQ80W88 542 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Kctd6Q8BNL5 237 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Fam102bQ8BQS4 339 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Copb1Q9JIF7 953 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ptpn23Q6PB44 1692 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Vmn1r209Q5NC97 312 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Atxn2lQ7TQH0 1049 aaKnown RBP13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Ankfy1Q810B6 1169 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Aldh1b1Q9CZS1 519 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Krt20Q9D312 431 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Rcan1Q9JHG6 198 aa13.09□□□□□ -0.31
Pcif1-201ENSMUST00000041643 Gimd1E9PW74 217 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm3893E9Q1I1 302 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Bach2P97303 839 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Arhgef18Q6P9R4 1021 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tmx4Q8C0L0 335 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 D1Pas1P16381 660 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ptgs1P22437 602 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ccdc51Q3URS9 406 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cyp7b1Q60991 507 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cnnm4Q69ZF7 771 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 GrapQ9CX99 217 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Mcur1Q9CXD6 340 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Acsl3Q9CZW4 720 aaKnown RBP13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cmtm5Q9D6G9 156 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Styxl1Q9DAR2 321 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Zfyve9A2A8R0 1397 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Stag2O35638 1231 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 L1camP11627 1260 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Lmnb1P14733 588 aaKnown RBP13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Znf830Q8R1N0 363 aaKnown RBP13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Sdr42e1Q9D665 394 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 A430078G23RikE9Q7Y4 484 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Phldb3E9QAF4 648 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 1810065E05RikQ5NC41 235 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Zfp397Q7TNK4 527 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Vps52Q8C754 723 aaKnown RBP13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Taf12Q8VE65 161 aa13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Telo2Q9DC40 840 aaKnown RBP13.08□□□□□ -0.32
Pcif1-201ENSMUST00000041643 ChkbO55229 394 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Q3TYL0 343 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Map3k11Q80XI6 850 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 PycardQ9EPB4 193 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ubxn8Q9QZ49 277 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Twf2Q9Z0P5 349 aaKnown RBP13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 GsdmeQ9Z2D3 512 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Mum1l1Q4VA55 681 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Krit1Q6S5J6 736 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ndufv1Q91YT0 464 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Psma7Q9Z2U0 248 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ccdc148Q6P5U8 527 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ube3cQ80U95 1083 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Dppa3Q8QZY3 150 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Atxn7Q8R4I1 867 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cbx6Q9DBY5 414 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 MyocO70624 490 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 GabpaQ00422 454 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Edrf1Q6GQV7 1239 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ptrh1Q8BW00 204 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ankk1Q8BZ25 745 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 GakQ99KY4 1305 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Apbb1ipQ8R5A3 670 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Antxr1Q9CZ52 562 aa13.07□□□□□ -0.32
Pcif1-201ENSMUST00000041643 TxkP42682 527 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tubb4bP68372 445 aaKnown RBP13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Psmd1Q3TXS7 953 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Mettl14Q3UIK4 456 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Scaf8Q6DID3 1268 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tor4aQ8BH02 426 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Pnpla7A2AJ88 1352 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Rab11fip4Q8BQP8 635 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 ClasrpQ8CFC7 668 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Desi2Q9D291 194 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Rsph3bQ9DA80 389 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms