RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Ccdc50Q810U5 305 aaKnown RBP25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Dmrtc1Q9D9R7 182 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Pex3Q9QXY9 372 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Fam81aQ3UXZ6 364 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Sp4Q62445 782 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 P3h4Q8K2B0 443 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cttnbp2nlQ99LJ0 638 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 BicraF8VPZ9 1578 aa25.2■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 CoilQ5SU73 570 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cadps2Q8BYR5 1297 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 PaoxQ8C0L6 504 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cgref1Q8R1U2 281 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 NsfP46460 744 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Sh3gl3Q62421 347 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Znf532Q6NXK2 1036 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cep70Q6IQY5 616 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Atp1a1Q8VDN2 1023 aaKnown RBP25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Apopt1Q9CQW7 192 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 1700029H14RikE9PY36 240 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Mier3Q3UHF3 551 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Dnajc17Q91WT4 303 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Casp8O89110 480 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cfap36Q8C6E0 343 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Kat14Q8CID0 779 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Nlgn1Q99K10 843 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ecel1Q9JMI0 775 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 EcsitQ9QZH6 435 aa25.19■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Sept2P42208 361 aaKnown RBP25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Gucy2eP52785 1108 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 MaeaQ4VC33 396 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Taf12Q8VE65 161 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Sytl1Q99N80 567 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Wdr17E9Q271 1322 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 C1qbpO35658 278 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 MpndQ3TV65 487 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Rnf207Q3V3A7 635 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ctdspl2Q8BG15 465 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Rwdd2aQ9D9S3 292 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 IdeQ9JHR7 1019 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Slc8a3S4R2P9 928 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Slc3a2P10852 526 aaKnown RBP25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Palb2Q3U0P1 1104 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Klhl38Q8BSF5 581 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Nup160Q9Z0W3 1402 aaKnown RBP25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Col17a1Q07563 1470 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Nova2D3YVV7 556 aaKnown RBP25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Pabpc4Q6PHQ9 660 aaKnown RBP25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ttc4Q8R3H9 386 aa25.18■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Trim5E9PV98 497 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Eif6O55135 245 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Pnma5Q5DTT8 618 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Clic6Q8BHB9 596 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Pdzd9Q9D9M4 266 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 AmphQ7TQF7 686 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Crybg3Q80W49 1005 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Znf518aB2RRF6 1478 aaKnown RBP25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Rsbn1lD3Z0K6 821 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Slc12a7Q9WVL3 1083 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Clasp1Q80TV8 1535 aaKnown RBP25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cfap221A9Q751 836 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ccdc153P0C7Q1 202 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Traf5P70191 558 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 PzpQ61838 1495 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Efcab6Q6P1E8 1516 aa25.17■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Eya3P97480 510 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ccdc40Q8BI79 1192 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Dennd4bQ3U1Y4 1499 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 GfapP03995 430 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ero1aQ8R180 464 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Psmd2Q8VDM4 908 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 IvlP48997 467 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ankrd13cQ3UX43 541 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 RpainQ9CWY9 219 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Mfap3lQ9D3X9 409 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 GsdmeQ9Z2D3 512 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Vstm4T1NXB5 319 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Zbtb38Q3LR78 1197 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 PodnQ7TQ62 611 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Phf20l1Q8CCJ9 1013 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Pdlim2Q8R1G6 349 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Erbb4Q61527 1308 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Kcnb2A6H8H5 907 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 YwhagP61982 247 aaKnown RBP25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Oxr1Q4KMM3 866 aa25.16■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Eif4g3Q80XI3 1579 aaKnown RBP25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Atp2b4Q6Q477 1205 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ciao1Q99KN2 339 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Kif21aQ9QXL2 1672 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Akap5D3YVF0 745 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 GsnP13020 780 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Cd22P35329 862 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Pfdn6Q03958 127 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ccdc169Q8BXX9 214 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 NpatQ8BMA5 1420 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Nxf7Q80SZ6 620 aaKnown RBP25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Ccdc92Q8VDN4 314 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Gli2Q0VGT2 1544 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Znf697Q569E7 569 aa25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Snip1Q8BIZ6 383 aaKnown RBP25.15■■□□□ 1.62
Sh3rf1-201ENSMUST00000034060 Dis3l2Q8CI75 870 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms