RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 WtapQ9ER69 396 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Tbx20Q9ES03 445 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Hmg20bQ9Z104 317 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 IkQ9Z1M8 557 aaKnown RBP9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 SrcapA0A087WQ44 3271 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Naaladl2A0A0N4SUJ3 795 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Pramef17A2ASJ1 475 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Nfx1B1AY10 1114 aaKnown RBP9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Tmem265E9Q8G3 109 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 MycP01108 439 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gpbp1l1Q6NZP2 473 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Znf618Q80YY7 953 aaKnown RBP9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Kctd3Q8BFX3 815 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Tpcn2Q8BWC0 731 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 9230110C19RikQ8CC70 267 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Atad2Q8CDM1 1040 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Nup88Q8CEC0 753 aaKnown RBP9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Stard7Q8R1R3 373 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Vmn1r203Q8R273 311 aa9.25□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Anapc15-psA0A140T8L6 141 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Skor2A7M7C7 1008 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 RarbP22605 482 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Dnajc2P54103 621 aaKnown RBP9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 NfibP97863 570 aaKnown RBP9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 1700013D24RikQ0P521 120 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Pgm5Q8BZF8 567 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Mrpl58Q8R035 206 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 E2f4Q8R0K9 410 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gpr108Q91WD0 569 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Snx29Q9D3S3 818 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Ftsj3Q9DBE9 838 aaKnown RBP9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Azi2Q9QYP6 405 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Ifi202Q9R002 445 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Sall1Q9ER74 1322 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Pdzrn4E9PUZ9 1014 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gm29094F6Q785 221 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Stag2O35638 1231 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Adamts10P58459 1104 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Rnf20Q5DTM8 973 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Cln3Q61124 438 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 C2cd5Q7TPS5 1016 aaKnown RBP9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gpcpd1Q8C0L9 675 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Q8C5S3 137 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Ccdc158Q8CDI6 1109 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Btbd7Q8CFE5 1130 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 NkapQ9D0F4 415 aaKnown RBP9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Scnn1bQ9WU38 638 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Suclg2Q9Z2I8 433 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Trappc3lQ4KL14 181 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Grm4Q68EF4 912 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 PigsQ6PD26 555 aaKnown RBP9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Usp6nlQ80XC3 819 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Cracr2bQ80ZJ8 394 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gimap7Q8R379 293 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Slc12a8Q8VI23 705 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Pcdhgc5Q91XW9 944 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Kdm8Q9CXT6 414 aa9.24□□□□□ -0.93
Ssr3-201ENSMUST00000029414 C87977A2A958 498 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Fyb2A2A995 729 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 March10E9PX79 788 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Traf3ip1Q149C2 625 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 PomkQ3TUA9 349 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Limch1Q3UH68 1057 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Tfap4Q9JIZ5 338 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Msgn1Q9JK54 188 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gm5114W4VSN8 858 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 JcadQ5DTX6 1320 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Irgm2A0A140LIF8 407 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Guca2bO09051 106 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Nr5a1P33242 462 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Csf2raQ00941 388 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Esyt1Q3U7R1 1092 aaKnown RBP9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Tmtc2Q56A06 836 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Mdh1bQ5F204 500 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Nsrp1Q5NCR9 542 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Prr11Q8BHE0 368 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 PdgfcQ8CI19 345 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Adgrf4Q9D2L6 698 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Fem1bQ9Z2G0 627 aa9.23□□□□□ -0.93
Ssr3-201ENSMUST00000029414 AV320801A2AWL3 467 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Gm15023L7MUB4 467 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Rbp3P49194 1234 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Mybpc2Q5XKE0 1136 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Paxip1Q6NZQ4 1056 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Fbxo11Q7TPD1 930 aaKnown RBP9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Tdp1Q8BJ37 609 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Cep55Q8BT07 462 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Smoc2Q8CD91 447 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Adamts9E9PUN6 1931 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Rps6P62754 249 aaKnown RBP9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Siah1bQ06985 282 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Atf7Q8R0S1 413 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Bud13Q8R149 637 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Cmtm5Q9D6G9 156 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Hic1Q9R1Y5 733 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Syngap1F6SEU4 1340 aa9.22□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Mboat4P0C7A3 435 aa9.21□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Ms4a2P20490 235 aa9.21□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Eepd1Q3TGW2 569 aa9.21□□□□□ -0.93
Ssr3-201ENSMUST00000029414 Prmt6Q6NZB1 378 aa9.21□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms