RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Tmem132dQ76HP3 1097 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Polr2bQ8CFI7 1174 aaKnown RBP13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tbc1d23Q8K0F1 684 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 GlyctkQ8QZY2 523 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ppp2r5dQ91V89 594 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Erp44Q9D1Q6 406 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Krt78E9Q0F0 1068 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pagr1bF6V0H0 108 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Crybg3Q80W49 1005 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cplx3Q8R1B5 158 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pagr1aQ99L02 253 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Speer3W4VSP1 261 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tns3Q5SSZ5 1440 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gm5580A0A0N4SVP8 411 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Arhgef10lA2AWP8 1280 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 DgkiD3YWQ0 1071 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cyp3a25O09158 503 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Adcy8P97490 1249 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Q3TTJ4 293 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Trip13Q3UA06 432 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Nxf2Q4ZGD8 691 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Clasp2Q8BRT1 1286 aaKnown RBP13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Taf12Q8VE65 161 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tmem132aQ922P8 1018 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Apopt1Q9CQW7 192 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Nr2e3Q9QXZ7 395 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tex13c2A0A0G2JGA3 530 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 DohhA0A1Y7VJ29 135 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Card6E9PWH2 1175 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Zbtb7aO88939 569 aaKnown RBP13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Nr2f2P43135 414 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Polr2fP61219 127 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rassf10Q8BL43 508 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tspyl4Q8VD63 406 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ighmbp2P40694 993 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gm5592Q3V0A6 857 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Bag2Q91YN9 210 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Krt34Q9D646 392 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Dpp7Q9ET22 506 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Brpf3B2KF05 1204 aaKnown RBP13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ccdc78D3Z5T1 437 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 XlrP05531 208 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ms4a2P20490 235 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ncoa7Q6DFV7 943 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Znf76Q8BMU0 568 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pus7lQ8CE46 702 aa13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Synpo2Q91YE8 1087 aaKnown RBP13.46□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Taf4bG5E8Z2 855 aa13.46□□□□□ -0.26
Ldb3-201ENSMUST00000022327 P4hbP09103 509 aaKnown RBP13.46□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Dok7Q18PE0 504 aa13.46□□□□□ -0.26
Ldb3-201ENSMUST00000022327 6820408C15RikQ8BJX2 354 aa13.46□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Scyl1Q9EQC5 806 aaKnown RBP13.46□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Arl6ip4Q9JM93 229 aa13.46□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Fyb2A2A995 729 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Zfp174B9EJW5 407 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Tnnc2P20801 160 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Anks1aP59672 1150 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Atp8b1Q148W0 1251 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Esyt2Q3TZZ7 845 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Actr5Q80US4 605 aaKnown RBP13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Iqcb1Q8BP00 598 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Nfe2l3Q9WTM4 660 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Gemin5Q8BX17 1502 aaKnown RBP13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Tmem179Q8BHH9 233 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Nrbp2Q91V36 499 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Pcdhb15Q91Y04 786 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Cdhr2E9Q7P9 1308 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Setd1aE9PYH6 1716 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Il7P10168 154 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Tshz1Q5DTH5 1084 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Dhx37Q6NZL1 1150 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 EngaseQ8BX80 734 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Znf428Q8C1M2 176 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Ccdc15Q8C9M2 810 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Nek9Q8K1R7 984 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Snrnp35Q9D384 244 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Strn3Q9ERG2 796 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Carmil3Q3UFQ8 1375 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Sox5P35710 763 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Trim56Q80VI1 734 aaKnown RBP13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Cog5Q8C0L8 829 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Vps37bQ8R0J7 285 aa13.45□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Nup62clA2AG10 272 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Serpini1O35684 410 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Atf2P16951 487 aaKnown RBP13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 NsfP46460 744 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Dynll1P63168 89 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 EgfrQ01279 1210 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Kmt5aQ2YDW7 349 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Ubn1Q4G0F8 1135 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 PodnQ7TQ62 611 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Snx14Q8BHY8 964 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Mei4Q8BRM6 389 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Atp1a1Q8VDN2 1023 aaKnown RBP13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Eaf2Q91ZD6 262 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Myo3bQ1EG27 1305 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Slc10a4Q3UEZ8 437 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 C87499Q3UX49 493 aa13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Ccdc84Q4VA36 332 aaKnown RBP13.44□□□□□ -0.26
Ldb3-201ENSMUST00000022327 Haus4Q8BFT2 363 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms