RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W TSC10P38342 320 aa4.86□□□□□ -1.63
VPS28YPL065W ARP1P38696 384 aa4.86□□□□□ -1.63
VPS28YPL065W NOC2P39744 710 aaKnown RBP4.86□□□□□ -1.63
VPS28YPL065W SPO22P40511 975 aa4.86□□□□□ -1.63
VPS28YPL065W HXT9P40885 567 aa4.86□□□□□ -1.63
VPS28YPL065W SAD1P43589 448 aa4.86□□□□□ -1.63
VPS28YPL065W EFM6P53970 246 aa4.86□□□□□ -1.63
VPS28YPL065W ADE13Q05911 482 aaKnown RBP4.86□□□□□ -1.63
VPS28YPL065W TEN1Q07921 160 aa4.86□□□□□ -1.63
VPS28YPL065W NRT1Q08485 598 aa4.86□□□□□ -1.63
VPS28YPL065W RPS10AQ08745 105 aaPredicted RBP4.86□□□□□ -1.63
VPS28YPL065W PUP3P25451 205 aaKnown RBP4.85□□□□□ -1.63
VPS28YPL065W SSE2P32590 693 aaKnown RBP4.85□□□□□ -1.63
VPS28YPL065W JNM1P36224 373 aa4.85□□□□□ -1.63
VPS28YPL065W RKM3P38222 552 aa4.85□□□□□ -1.63
VPS28YPL065W YIL060WP40519 144 aa4.85□□□□□ -1.63
VPS28YPL065W IRC6P43615 237 aa4.85□□□□□ -1.63
VPS28YPL065W RMD8P43620 662 aa4.85□□□□□ -1.63
VPS28YPL065W VPS25P47142 202 aa4.85□□□□□ -1.63
VPS28YPL065W SGM1P47166 707 aa4.85□□□□□ -1.63
VPS28YPL065W YGL260WP53056 76 aa4.85□□□□□ -1.63
VPS28YPL065W SGF73P53165 657 aa4.85□□□□□ -1.63
VPS28YPL065W MRPL19P53875 158 aa4.85□□□□□ -1.63
VPS28YPL065W EMI2Q04409 500 aaKnown RBP4.85□□□□□ -1.63
VPS28YPL065W FMP40Q08968 688 aaPredicted RBP4.85□□□□□ -1.63
VPS28YPL065W YJR112W-AQ3E743 109 aa4.85□□□□□ -1.63
VPS28YPL065W SGS1P35187 1447 aa4.84□□□□□ -1.63
VPS28YPL065W PHO2P07269 559 aa4.84□□□□□ -1.63
VPS28YPL065W MRP13P12686 339 aa4.84□□□□□ -1.63
VPS28YPL065W TIF3P34167 436 aaKnown RBP4.84□□□□□ -1.63
VPS28YPL065W MIA40P36046 403 aa4.84□□□□□ -1.63
VPS28YPL065W DBP8P38719 431 aa4.84□□□□□ -1.63
VPS28YPL065W YEL057CP39983 233 aa4.84□□□□□ -1.63
VPS28YPL065W VRG4P40107 337 aa4.84□□□□□ -1.63
VPS28YPL065W RPS10BP46784 105 aaKnown RBP4.84□□□□□ -1.63
VPS28YPL065W CAC2Q04199 468 aa4.84□□□□□ -1.63
VPS28YPL065W ATG26Q06321 1198 aa4.84□□□□□ -1.63
VPS28YPL065W POS5Q06892 414 aa4.84□□□□□ -1.63
VPS28YPL065W MET17P06106 444 aa4.83□□□□□ -1.64
VPS28YPL065W IMG1P25626 169 aa4.83□□□□□ -1.64
VPS28YPL065W YBR144CP34215 104 aa4.83□□□□□ -1.64
VPS28YPL065W LEU5P38702 357 aa4.83□□□□□ -1.64
VPS28YPL065W DOT5P40553 215 aa4.83□□□□□ -1.64
VPS28YPL065W PTR3P43606 678 aa4.83□□□□□ -1.64
VPS28YPL065W SRB7P47822 140 aa4.83□□□□□ -1.64
VPS28YPL065W HOS2P53096 452 aaPredicted RBP4.83□□□□□ -1.64
VPS28YPL065W IPI3P53877 555 aa4.83□□□□□ -1.64
VPS28YPL065W SCW10Q04951 389 aa4.83□□□□□ -1.64
VPS28YPL065W YTH1Q06102 208 aaPredicted RBP4.83□□□□□ -1.64
VPS28YPL065W ECM30Q06673 1274 aa4.83□□□□□ -1.64
VPS28YPL065W EDE1P34216 1381 aa4.82□□□□□ -1.64
VPS28YPL065W YFL068WP0CX99 160 aa4.82□□□□□ -1.64
VPS28YPL065W YLL066W-AP0CY00 160 aa4.82□□□□□ -1.64
VPS28YPL065W YLL067W-AP0CY01 160 aa4.82□□□□□ -1.64
VPS28YPL065W OCA4P25366 362 aa4.82□□□□□ -1.64
VPS28YPL065W YBL055CP34220 418 aaPredicted RBP4.82□□□□□ -1.64
VPS28YPL065W MPE1P35728 441 aaKnown RBP4.82□□□□□ -1.64
VPS28YPL065W NUP133P36161 1157 aa4.82□□□□□ -1.64
VPS28YPL065W STV1P37296 890 aa4.82□□□□□ -1.64
VPS28YPL065W ARF3P40994 183 aaRIP-Chip data4.82□□□□□ -1.64not detected
VPS28YPL065W FAR3P46671 204 aa4.82□□□□□ -1.64
VPS28YPL065W ERG26P53199 349 aaKnown RBP4.82□□□□□ -1.64
VPS28YPL065W BET4Q00618 327 aa4.82□□□□□ -1.64
VPS28YPL065W RSM23Q01163 450 aa4.82□□□□□ -1.64
VPS28YPL065W TAF11Q04226 346 aa4.82□□□□□ -1.64
VPS28YPL065W ARP10Q04549 284 aa4.82□□□□□ -1.64
VPS28YPL065W VPS38Q05919 439 aa4.82□□□□□ -1.64
VPS28YPL065W UTP21Q06078 939 aaPredicted RBP4.82□□□□□ -1.64
VPS28YPL065W MCP2Q06567 569 aa4.82□□□□□ -1.64
VPS28YPL065W GAL80P04387 435 aa4.81□□□□□ -1.64
VPS28YPL065W RPL42AP0CX27 106 aaKnown RBP4.81□□□□□ -1.64
VPS28YPL065W RPL42BP0CX28 106 aaKnown RBP4.81□□□□□ -1.64
VPS28YPL065W SNF3P10870 884 aa4.81□□□□□ -1.64
VPS28YPL065W CKA1P15790 372 aa4.81□□□□□ -1.64
VPS28YPL065W RPB8P20436 146 aa4.81□□□□□ -1.64
VPS28YPL065W SEF1P34228 1148 aa4.81□□□□□ -1.64
VPS28YPL065W ICS2P38284 255 aa4.81□□□□□ -1.64
VPS28YPL065W PCL6P40038 420 aa4.81□□□□□ -1.64
VPS28YPL065W MET28P40573 187 aa4.81□□□□□ -1.64
VPS28YPL065W APT1P49435 187 aaKnown RBP4.81□□□□□ -1.64
VPS28YPL065W IMD4P50094 524 aaKnown RBP4.81□□□□□ -1.64
VPS28YPL065W VID30P53076 958 aa4.81□□□□□ -1.64
VPS28YPL065W YGR066CP53242 292 aa4.81□□□□□ -1.64
VPS28YPL065W YGR127WP53275 312 aa4.81□□□□□ -1.64
VPS28YPL065W IZH1Q03419 316 aa4.81□□□□□ -1.64
VPS28YPL065W YDL218WQ07629 317 aa4.81□□□□□ -1.64
VPS28YPL065W ARG81P05085 880 aa4.8□□□□□ -1.64
VPS28YPL065W CBP1P07252 654 aa4.8□□□□□ -1.64
VPS28YPL065W BOS1P25385 244 aa4.8□□□□□ -1.64
VPS28YPL065W GAC1P28006 793 aa4.8□□□□□ -1.64
VPS28YPL065W TCD2P36101 447 aaKnown RBP4.8□□□□□ -1.64
VPS28YPL065W ALG5P40350 334 aa4.8□□□□□ -1.64
VPS28YPL065W PKP2P53170 491 aa4.8□□□□□ -1.64
VPS28YPL065W MSC1Q03104 513 aa4.8□□□□□ -1.64
VPS28YPL065W RLM1Q12224 676 aa4.8□□□□□ -1.64
VPS28YPL065W HSH49Q99181 213 aaPredicted RBP4.8□□□□□ -1.64
VPS28YPL065W FOB1O13329 566 aa4.79□□□□□ -1.64
VPS28YPL065W PUT2P07275 575 aa4.79□□□□□ -1.64
VPS28YPL065W DFR1P07807 211 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
VPS28YPL065W PDA1P16387 420 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms